Setaria viridis (green foxtail): 117860188
Help
Entry
117860188 CDS
T07951
Name
(RefSeq) transcription factor bHLH94
KO
K28356
basic helix-loop-helix transcription factor family protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117860188
Transcription factors [BR:
svs03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
117860188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
UCMA
Motif
Other DBs
NCBI-GeneID:
117860188
NCBI-ProteinID:
XP_034599333
LinkDB
All DBs
Position
6:31599052..31601024
Genome browser
AA seq
378 aa
AA seq
DB search
MALEAVVFCEGLFGSWAMAAAPGGGGGWSWGHDGNEHGGAMEGMMDLEGGTAAAYWEVGA
SSSVMMKGPDQEPDGSSAAPPPPENGCGGGNAAAAGAGFSQEVLTVATTATVMSPPSAAA
GRRKRRRTRSVKNMEEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASII
GGAINYVKELEQLLQSLEARKHARRHDPSPGSGAGDAAPAPFAGFFTFPQYSMSAGARSP
AATADTPPADDEQSPNNADADGNNGGDDDDASGSRPSSVAEVEVTMVESHANLKLLSRRR
PRQLLRLVAGLQGHRLSVLHLNATSDDARHMALYSLSLKVEDDCALSSVDDIAAAVHRIV
EAIDQEEGGAELRSQAEE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgaggccgtggtgttctgtgagggactcttcggcagctgggccatggcggcg
gctcccggaggaggaggagggtggagctggggccatgacggaaatgagcatggcggggcc
atggaggggatgatggacttggaagggggcaccgccgccgcctactgggaggtgggcgca
agctcctccgtgatgatgaaagggcctgatcaggagccggacggcagctctgctgcgccg
ccgccgcccgagaacggatgcggcggtggcaatgcagcagcagctggtgccggcttttcg
caggaggtgctaaccgtggcgacaacggcgacggtaatgtcgccgccgtcggcggcggct
gggaggcggaagcgccggaggacgaggagcgtcaagaacatggaggaggtggagagccag
cggatgacccacatcgccgtggagcgcaaccgccgcaagcagatgaacgagtacctcgcc
gtgctccggtccctcatgccggcgtcctacgtgcaaaggggagaccaggcgtccataatt
ggcggcgcaatcaactacgtcaaggagctggagcagctgctccagtcgctggaggcgcgg
aaacacgcccgccgccacgacccgtcccccggctccggcgccggcgacgctgcgcccgcg
cccttcgcgggcttcttcaccttcccgcagtactccatgagcgccggcgcccgctccccc
gccgccaccgcagacacgccacccgcagacgacgagcagagcccaaacaacgctgacgcg
gacggcaacaacggtggcgacgacgacgacgcctcgggctcgaggccatcgtccgtggca
gaggtcgaggtgaccatggtggagagccacgcgaatctgaagctgctgtcccggcggcgc
ccgcggcagctgctgcggctggtcgccgggctgcagggccaccgcctctccgtgctgcac
ctcaacgcgaccagcgacgacgcccgccacatggccctctattccctcagcctcaaggtg
gaagacgactgcgcgctctcgtcggtggacgacatcgcggcggcggtgcaccgcatcgtg
gaggcgatcgaccaagaggagggcggcgccgagctcagatcgcaggctgaagaataa
DBGET
integrated database retrieval system
