Setaria viridis (green foxtail): 117860289
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Entry
117860289 CDS
T07951
Name
(RefSeq) tryptophan decarboxylase 1
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00350
Tyrosine metabolism
svs00360
Phenylalanine metabolism
svs00380
Tryptophan metabolism
svs00901
Indole alkaloid biosynthesis
svs00950
Isoquinoline alkaloid biosynthesis
svs00965
Betalain biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
117860289
00360 Phenylalanine metabolism
117860289
00380 Tryptophan metabolism
117860289
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
117860289
00950 Isoquinoline alkaloid biosynthesis
117860289
00965 Betalain biosynthesis
117860289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117860289
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
117860289
4.1.1.105 L-tryptophan decarboxylase
117860289
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117860289
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-GeneID:
117860289
NCBI-ProteinID:
XP_034599446
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Position
6:6084368..6086217
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AA seq
512 aa
AA seq
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MGSLDTNPAAFSVFGDEAAGGFQPLNAEDVRSYLHKAVDFISDYYKSLESLPVLPDVKPG
YLQNELQAAPPTSSAPFDVAMKELRASVVPGMTHWASPNFFAFFPSTNSAAAIAGDLIAS
AMNTVGFTWQANPAATEMEVLALDWLAQLLRLPASLMNRTAAGRGTGGGVILGTTSEAML
VTLVAARDAALRRSGSEGVAGLPRLAVYAADQTHSTFFKACRLAGFDPANIRSIPTGPET
DYALDPAKLLEVMEADVAAGLVPTYICATVGTTSSNAVDPVGAIADAAALFNAWVHVDAA
YAGSACICPEFRHHLAGVERVDSISMSPHKWLLTCLDCTCLWVRDTHRLTDSLETNPEYL
KNDASDSGAVTDLKDMQVGVGRRFRGLKLWMVMRTYGAAKLQEHIRSDVAMAKMFEENVR
SDDRFEVVVPRNFALVCFRIKPHGGMTEEDADEANHELMERLNRTGKAYLAHTVVGGKFV
LRFAVGSSLQEERHVRSAWELIKKTTAEIMQD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcttggacaccaacccggcagccttctccgtcttcggcgacgaggccgccggc
ggcttccagccgctgaatgccgaggacgtccgctcgtacctccacaaggccgtcgacttc
atctccgactactacaagtccctcgagtccctgcccgtgctccccgacgtcaagccgggg
tacctgcagaacgagctgcaggcggcgccgcccaccagctccgcccccttcgacgtcgcc
atgaaggagctcagggcctccgtcgtccccggcatgacccactgggccagccccaacttc
ttcgccttcttcccctccaccaacagcgccgccgccatcgccggcgacctcatcgcctcg
gcgatgaacaccgtcgggttcacttggcaggccaaccccgccgccaccgagatggaggtc
ctcgcgctcgactggctcgcccagctcctccgcctccccgcgagcttaatgaaccgcacc
gccgccggccgcggcaccggcggcggcgtcatcctcggcaccaccagcgaggccatgctc
gtcacgctcgtcgccgcgcgcgacgccgcgctgcgccggagcgggtcggagggcgtcgcc
ggcctgccgcgcctcgccgtctacgccgccgaccagacccactccaccttcttcaaggcg
tgccgcctcgccggcttcgacccggccaacatccgctccatccccaccggcccggagacg
gactacgccctcgacccggcgaagctcctcgaggtcatggaggccgacgtcgccgccggc
ctcgtgccgacctacatctgcgccaccgtcggcaccacctcctccaacgccgtcgacccc
gtcggagccatcgccgacgccgccgcgctgttcaacgcgtgggtgcacgtcgacgccgcc
tacgccggcagcgcgtgcatctgcccggagttccggcaccacctcgccggcgtcgagcgc
gtcgactccatcagcatgagcccgcacaagtggctgctgacgtgcctcgactgcacctgc
ctgtgggtccgcgacacgcaccggctcaccgactcgctggagaccaacccggagtacctc
aagaacgacgccagcgactccggcgccgtcaccgacctcaaggacatgcaggtcggcgtc
ggccgccgattccgggggctcaagctctggatggtcatgcgcacatacggcgccgccaag
ctccaggagcacatccgcagcgacgttgccatggccaagatgttcgaggaaaatgtcagg
tccgatgacaggttcgaggtcgtcgtgccgaggaacttcgcccttgtctgttttaggatc
aagcctcacggcggcatgacggaggaggacgccgacgaggccaaccatgagctcatggaa
cgcctgaacaggaccgggaaggcgtacctggcgcacacggtggtcggcggcaagttcgtg
ctgcggttcgcggtggggtcgtcgctgcaggaagagaggcacgtccggagtgcgtgggag
ctcatcaagaagacgaccgctgagatcatgcaggattag
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