Setaria viridis (green foxtail): 117860356
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Entry
117860356 CDS
T07951
Name
(RefSeq) pumilio homolog 5 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
svs
Setaria viridis (green foxtail)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
117860356
NCBI-ProteinID:
XP_034599526
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Position
6:33476399..33485105
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AA seq
1151 aa
AA seq
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MRVPNVRVCIVLLPHNPAVLVHLTQTMPCDPVCPIPTACLPKHATTVAPSLAAQAQVVAG
FISDRSVRPHPFDPACHPSSCPLSHKRKRVKRRWRKGKLMPERVSVLNGVDKAEVIGASG
EREKLVTASFGRGTTGGGAGAWSPRVSGCRPAGSGATSLMATESAVRLIGGTGARDWSKG
FGAFDSSVGGLSGEDLGFVDNGTGVYSGWRESVPNRSGSAPPSMEGSLAALGHLIGQQSG
SFEASLASLDNMTDSSKSEEQLRGDPAYFEYYGSKVNLNPRLPPPLISRESRRLMNRVGK
AKEWRVVSQDNSSKGSIYIPRSTLSTHKEEPEDDKSPRLDSSSVEDAQIISSTSNFESQD
FMLESFQQSVASLPDSSYSNPSNNNTGDAMAARSDINLSRSLSVDAVKQSDLNSWTPKSP
LKSTISNDLSSSPLSSSSYSGSKTGMQTSQQEKLAIDTKLGNAVLGSGAAVTELDNVESN
MKNLKLSLDDHSSSSVKQKWQDNVLQQYGPLLPAQGDPIQMTPQGPHLSHVPFADNLAHT
QLKLPTGDMQQFLPQLGMTTPFFTPNSFGSPYYQNLHPAAFPTSIGTGGYPVTGSVLPPF
MGNYPPQGSLATPLDSPMTPSFSGRPSGFPSTGNPTGGTDFMQSYKMYGQLGVGMQPSIP
DPNFIHFFQQPSLLQYNGGNQYNPMVPRFTVVGNPAESFDPQKMIPQTAYPSDQRLQLPR
TGFPNSPTARRGGAVPNYPGMSPYVGVPMSYPTSPVFQGQTLPGALPPGRRNDSGFQSPS
RNITANSGIQGQRERQKFDEPKACSFLEELKSNRARRVELSDITGRIVEYSADQHGSRFI
QQKLENCTAEEKASVFTEVLPHAASLMTDVFGNYVIQKFFEHGTREQRRDLATKLVGHVL
PLSLQMYGCRVIQKALEVMEIDQKIDLVRELDGHVMRCVRDQNGNHVIQKCIECVPTEHI
GFIVSAFQGQVANLSMHPYGCRVIQRVLEHCGGNSQGQCIIDEILQSACILAQDQYGNYV
TQHVLERGKAHERSQIITKLAGQVVTMSQNKFASNVIEKCFQHGDIAERDLLIRQIVEQT
EGNDNLLAMMKDQFANYVVQKILETCNESQRELLISRVKGHLQALRKYTYGKHIVSRVEQ
LCGEGPAESDS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtccccaatgtccgtgtatgcatagtgctgctaccgcataatcctgctgtccta
gttcaccttacacaaacgatgccttgtgaccctgtttgtcccatccccactgcatgcctc
ccaaagcatgccaccacggtggcacccagcctagccgcacaggcacaggtggttgcaggt
tttataagcgaccgatcagtacggccgcacccattcgaccccgcctgtcatccatcctct
tgtccactgagtcacaaaagaaagagagtaaaacggaggtggaggaaaggaaagctcatg
ccagagagagtgagtgttctcaatggggtggataaggctgaggttattggtgcctctgga
gaaagggagaagcttgtcacggcgagcttcgggaggggaaccactggtggtggcgctggt
gcttggtcgcctagggtttccggctgccggccagctggatcgggggccacaagtctaatg
gctactgagagtgctgtccgattaattggtgggacaggggctagggactggagtaagggc
tttggtgcatttgactcatcagttggtggcctttcaggggaagatttgggatttgtggat
aatggcactggggtttatagtggctggagggaatctgtcccaaatcgcagtggaagtgca
ccgcctagcatggaaggatctcttgctgctcttggtcatctcattggccagcagagtggg
agctttgaagccagtttagcaagcttggataacatgactgacagttccaagtctgaggag
caactgcgtggtgatccagcatattttgagtattatgggtccaaggtgaatctgaaccca
aggctccctccaccacttatttcgagggagagccgccgattaatgaaccgggttggcaag
gctaaagaatggagggtggtctcccaagataacagcagcaaaggctccatatatattcct
cgatctactctatcaactcacaaagaagagccagaggatgataaatctccaagattggat
tcaagttcggtggaggatgcccagattatctccagtacatccaactttgagagccaggat
tttatgctggagagctttcagcagagtgttgcttctttgcctgatagttcatattctaat
ccttcaaataacaacactggtgatgctatggctgcacgttctgacataaatttatcaagg
agtttgtcagtggatgctgtcaagcaatcggatttgaactcttggacaccaaaaagccca
ctgaaaagtactattagcaatgacctttcatcgtcacccctttccagttcatcatattct
ggtagcaaaactggtatgcaaacttctcagcaagaaaagctggccatagacaccaaactt
ggaaatgctgtgcttggcagtggtgcagctgttactgagcttgataatgtggaatccaat
atgaagaatttgaagttgagtttggatgaccattcatcctcatctgttaagcagaagtgg
caggacaatgtcttgcagcagtatggccccttgctcccagcccaaggtgatcctattcaa
atgactcctcaaggaccacatctttcccatgttccttttgctgataacttggctcatact
cagcttaagttgcctactggtgacatgcagcaatttttaccacagcttggtatgacaaca
cctttcttcacaccaaattcttttggaagcccttattatcagaatttgcaccctgcagca
tttccaacctcaattggaactggcgggtaccctgtaactggttcagttttgccacctttt
atgggcaattatcctcctcaaggttctcttgctacacctcttgacagtccaatgactcca
agctttagtggcaggccatctggttttccttcaacagggaatcctactgggggaacagat
tttatgcagtcatataaaatgtacggacaacttggggttggtatgcagccatccattcct
gacccaaacttcattcatttctttcagcagccctcattacttcagtataatggtggaaat
caatacaatccaatggtcccgagatttactgttgttgggaatccagctgaaagctttgat
ccacaaaagatgatacctcaaactgcatacccatctgatcagaggcttcaacttccaaga
actggttttcctaattctcctacagccagaagaggaggggctgttccaaattatccaggc
atgtcaccctatgttggagtaccgatgagttaccctacaagtccggtgtttcagggacaa
acattgcctggagcattgcctcctggtaggagaaatgactctggatttcagtccccctca
agaaatattactgctaattctgggattcaaggacagcgagaaagacagaagtttgatgaa
ccaaaggcctgctctttcctagaagaattgaagtccaacagagcacgtagggttgagcta
tctgatatcacaggtcgtatagtggaatacagtgctgaccaacatggtagccgattcata
cagcagaagttggaaaactgcactgccgaagagaaggcatctgtgtttacagaagttctt
ccacatgctgcatcattaatgactgacgtttttgggaactatgtgatccaaaagttcttt
gaacatggaactcgtgagcaaaggagggatcttgccactaagcttgttggtcatgttttg
cctttgagtcttcagatgtatggctgcagagtaattcagaaggctcttgaagttatggaa
attgaccagaaaatagatctagttcgtgagcttgatggacatgttatgcgatgtgttcgt
gatcaaaatggaaatcatgttatacagaagtgcattgaatgtgtccctactgaacatatt
ggtttcatagtatctgcttttcaaggacaagttgctaacctttcaatgcacccatatggt
tgccgtgtaattcagagagttttggagcattgtggtggtaattcacaaggccagtgcata
atagatgagattttgcagtcagcgtgcatccttgctcaagatcagtatggcaactatgtt
acacagcatgttctagaaagaggaaaagctcatgagaggagccaaattattactaaattg
gctggacaggttgttaccatgagccaaaataaattcgcatcaaatgtgatagagaagtgt
tttcagcatggtgacattgcggagcgggatcttctgatcaggcagattgtggagcagaca
gagggcaatgacaatttgctggcaatgatgaaggaccagtttgctaattatgtggttcag
aagatactcgaaacatgcaatgagagtcagcgggaactcctcatcagccgtgtaaagggt
catctgcaagcattgaggaagtacacctatggcaagcatattgtaagccgagttgagcag
ctctgtggtgaaggacctgccgagtcagattcttga
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integrated database retrieval system