KEGG   Setaria viridis (green foxtail): 117860356
Entry
117860356         CDS       T07951                                 
Name
(RefSeq) pumilio homolog 5 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
svs  Setaria viridis (green foxtail)
SSDB
Motif
Pfam: PUF PUF_NOP9
Other DBs
NCBI-GeneID: 117860356
NCBI-ProteinID: XP_034599526
LinkDB
Position
6:33476399..33485105
AA seq 1151 aa
MRVPNVRVCIVLLPHNPAVLVHLTQTMPCDPVCPIPTACLPKHATTVAPSLAAQAQVVAG
FISDRSVRPHPFDPACHPSSCPLSHKRKRVKRRWRKGKLMPERVSVLNGVDKAEVIGASG
EREKLVTASFGRGTTGGGAGAWSPRVSGCRPAGSGATSLMATESAVRLIGGTGARDWSKG
FGAFDSSVGGLSGEDLGFVDNGTGVYSGWRESVPNRSGSAPPSMEGSLAALGHLIGQQSG
SFEASLASLDNMTDSSKSEEQLRGDPAYFEYYGSKVNLNPRLPPPLISRESRRLMNRVGK
AKEWRVVSQDNSSKGSIYIPRSTLSTHKEEPEDDKSPRLDSSSVEDAQIISSTSNFESQD
FMLESFQQSVASLPDSSYSNPSNNNTGDAMAARSDINLSRSLSVDAVKQSDLNSWTPKSP
LKSTISNDLSSSPLSSSSYSGSKTGMQTSQQEKLAIDTKLGNAVLGSGAAVTELDNVESN
MKNLKLSLDDHSSSSVKQKWQDNVLQQYGPLLPAQGDPIQMTPQGPHLSHVPFADNLAHT
QLKLPTGDMQQFLPQLGMTTPFFTPNSFGSPYYQNLHPAAFPTSIGTGGYPVTGSVLPPF
MGNYPPQGSLATPLDSPMTPSFSGRPSGFPSTGNPTGGTDFMQSYKMYGQLGVGMQPSIP
DPNFIHFFQQPSLLQYNGGNQYNPMVPRFTVVGNPAESFDPQKMIPQTAYPSDQRLQLPR
TGFPNSPTARRGGAVPNYPGMSPYVGVPMSYPTSPVFQGQTLPGALPPGRRNDSGFQSPS
RNITANSGIQGQRERQKFDEPKACSFLEELKSNRARRVELSDITGRIVEYSADQHGSRFI
QQKLENCTAEEKASVFTEVLPHAASLMTDVFGNYVIQKFFEHGTREQRRDLATKLVGHVL
PLSLQMYGCRVIQKALEVMEIDQKIDLVRELDGHVMRCVRDQNGNHVIQKCIECVPTEHI
GFIVSAFQGQVANLSMHPYGCRVIQRVLEHCGGNSQGQCIIDEILQSACILAQDQYGNYV
TQHVLERGKAHERSQIITKLAGQVVTMSQNKFASNVIEKCFQHGDIAERDLLIRQIVEQT
EGNDNLLAMMKDQFANYVVQKILETCNESQRELLISRVKGHLQALRKYTYGKHIVSRVEQ
LCGEGPAESDS
NT seq 3456 nt   +upstreamnt  +downstreamnt
atgcgtgtccccaatgtccgtgtatgcatagtgctgctaccgcataatcctgctgtccta
gttcaccttacacaaacgatgccttgtgaccctgtttgtcccatccccactgcatgcctc
ccaaagcatgccaccacggtggcacccagcctagccgcacaggcacaggtggttgcaggt
tttataagcgaccgatcagtacggccgcacccattcgaccccgcctgtcatccatcctct
tgtccactgagtcacaaaagaaagagagtaaaacggaggtggaggaaaggaaagctcatg
ccagagagagtgagtgttctcaatggggtggataaggctgaggttattggtgcctctgga
gaaagggagaagcttgtcacggcgagcttcgggaggggaaccactggtggtggcgctggt
gcttggtcgcctagggtttccggctgccggccagctggatcgggggccacaagtctaatg
gctactgagagtgctgtccgattaattggtgggacaggggctagggactggagtaagggc
tttggtgcatttgactcatcagttggtggcctttcaggggaagatttgggatttgtggat
aatggcactggggtttatagtggctggagggaatctgtcccaaatcgcagtggaagtgca
ccgcctagcatggaaggatctcttgctgctcttggtcatctcattggccagcagagtggg
agctttgaagccagtttagcaagcttggataacatgactgacagttccaagtctgaggag
caactgcgtggtgatccagcatattttgagtattatgggtccaaggtgaatctgaaccca
aggctccctccaccacttatttcgagggagagccgccgattaatgaaccgggttggcaag
gctaaagaatggagggtggtctcccaagataacagcagcaaaggctccatatatattcct
cgatctactctatcaactcacaaagaagagccagaggatgataaatctccaagattggat
tcaagttcggtggaggatgcccagattatctccagtacatccaactttgagagccaggat
tttatgctggagagctttcagcagagtgttgcttctttgcctgatagttcatattctaat
ccttcaaataacaacactggtgatgctatggctgcacgttctgacataaatttatcaagg
agtttgtcagtggatgctgtcaagcaatcggatttgaactcttggacaccaaaaagccca
ctgaaaagtactattagcaatgacctttcatcgtcacccctttccagttcatcatattct
ggtagcaaaactggtatgcaaacttctcagcaagaaaagctggccatagacaccaaactt
ggaaatgctgtgcttggcagtggtgcagctgttactgagcttgataatgtggaatccaat
atgaagaatttgaagttgagtttggatgaccattcatcctcatctgttaagcagaagtgg
caggacaatgtcttgcagcagtatggccccttgctcccagcccaaggtgatcctattcaa
atgactcctcaaggaccacatctttcccatgttccttttgctgataacttggctcatact
cagcttaagttgcctactggtgacatgcagcaatttttaccacagcttggtatgacaaca
cctttcttcacaccaaattcttttggaagcccttattatcagaatttgcaccctgcagca
tttccaacctcaattggaactggcgggtaccctgtaactggttcagttttgccacctttt
atgggcaattatcctcctcaaggttctcttgctacacctcttgacagtccaatgactcca
agctttagtggcaggccatctggttttccttcaacagggaatcctactgggggaacagat
tttatgcagtcatataaaatgtacggacaacttggggttggtatgcagccatccattcct
gacccaaacttcattcatttctttcagcagccctcattacttcagtataatggtggaaat
caatacaatccaatggtcccgagatttactgttgttgggaatccagctgaaagctttgat
ccacaaaagatgatacctcaaactgcatacccatctgatcagaggcttcaacttccaaga
actggttttcctaattctcctacagccagaagaggaggggctgttccaaattatccaggc
atgtcaccctatgttggagtaccgatgagttaccctacaagtccggtgtttcagggacaa
acattgcctggagcattgcctcctggtaggagaaatgactctggatttcagtccccctca
agaaatattactgctaattctgggattcaaggacagcgagaaagacagaagtttgatgaa
ccaaaggcctgctctttcctagaagaattgaagtccaacagagcacgtagggttgagcta
tctgatatcacaggtcgtatagtggaatacagtgctgaccaacatggtagccgattcata
cagcagaagttggaaaactgcactgccgaagagaaggcatctgtgtttacagaagttctt
ccacatgctgcatcattaatgactgacgtttttgggaactatgtgatccaaaagttcttt
gaacatggaactcgtgagcaaaggagggatcttgccactaagcttgttggtcatgttttg
cctttgagtcttcagatgtatggctgcagagtaattcagaaggctcttgaagttatggaa
attgaccagaaaatagatctagttcgtgagcttgatggacatgttatgcgatgtgttcgt
gatcaaaatggaaatcatgttatacagaagtgcattgaatgtgtccctactgaacatatt
ggtttcatagtatctgcttttcaaggacaagttgctaacctttcaatgcacccatatggt
tgccgtgtaattcagagagttttggagcattgtggtggtaattcacaaggccagtgcata
atagatgagattttgcagtcagcgtgcatccttgctcaagatcagtatggcaactatgtt
acacagcatgttctagaaagaggaaaagctcatgagaggagccaaattattactaaattg
gctggacaggttgttaccatgagccaaaataaattcgcatcaaatgtgatagagaagtgt
tttcagcatggtgacattgcggagcgggatcttctgatcaggcagattgtggagcagaca
gagggcaatgacaatttgctggcaatgatgaaggaccagtttgctaattatgtggttcag
aagatactcgaaacatgcaatgagagtcagcgggaactcctcatcagccgtgtaaagggt
catctgcaagcattgaggaagtacacctatggcaagcatattgtaagccgagttgagcag
ctctgtggtgaaggacctgccgagtcagattcttga

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