Setaria viridis (green foxtail): 117860357
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Entry
117860357 CDS
T07951
Name
(RefSeq) peroxisome biogenesis protein 5 isoform X1
KO
K13342
peroxin-5
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117860357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117860357
Membrane trafficking [BR:
svs04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117860357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_14
TPR_19
TPR_7
TPR_9
TPR_12
PPTA
TPR_20
PsiA
PEX18_PEX21_C
TPR_10
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
117860357
NCBI-ProteinID:
XP_034599528
LinkDB
All DBs
Position
6:32475853..32483927
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AA seq
734 aa
AA seq
DB search
MAMRHLITGQNSCAPDGASSSNPLNAFANAVLGQSSKTRSIKELPGSVSVPSTSDFGTAA
PLSTIPGSDDEFKQDQRPLARGADFIHWGPANDWIESFRPPGVPEFGVTESQVAEFDQIY
NNTGTTIGPPLDGPPQRVLSGVLHSFLASGRAGVPFQPVPVPALGLSESDKQCIRDRSCI
MARHILADQPEEYIQAQVNTLLHSLDIDNRMRGPMHGQYPELEQYWNQSQSSMGPASMHN
AADKWITEFGNQNNNPESWANSFEQQYGPNGWASEFEQHQSQMAMGQMGGANMASLAAME
QSRMLAQTLASNNDPKFQNSKFFQFVSKMSRGELIIEDNQVKQGSASQSNGWADEFQTQY
NANANTWADQFAHEELSQGADKWASEFSSQHNQGALNESWVDEFSKLNVTDEWAEEFSGG
GFGESSADPWADEFQEQLSSFKQSSGASRGVYVFSEMNPYVGHPNPMQEGQELFRKGLLS
EAVLALEAEVLKNPDNAEGWRLLGVTHAENDDDQQAIAAMMRAQEANPTNLEVLLALGVS
HTNELEQGEALRYLYRWLQNHPKYGGLAPPQSTDSPYGPDVVRLFNEAAQMSPEDADVHI
VLGVLYNLSREYDKAIASFKTALQLKPQDYSLWNKLGATQANSIQSADAILAYQKALDLK
PNYVRAWANMGISYANQGLYEDSIRYYVRAVAMNPKADNAWQYLRISLSNASRADMIAAC
DARNLDALQKEFPL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcggcacctcatcacgggccagaacagctgcgccccggacggcgcctcgtcg
tccaaccccctcaacgccttcgccaacgccgtcctcggccagtcctccaagacgcggtca
ataaaggaacttcctggctcagtcagtgttccatctacatctgattttggcacagctgct
cccttgtcaaccatcccaggttcagatgatgagttcaaacaagatcaacgaccccttgca
cggggtgccgacttcattcattggggtcctgctaatgattggattgaatcttttcgccct
cctggggttcctgaatttggagtaacagaatcacaagttgcagaatttgaccaaatctat
aacaatacagggacaaccattggaccgcccttggatggtccaccacaaagggtgttgtct
ggtgtcttgcattcttttcttgcaagtggcagagctggtgtgccgtttcaacctgttcca
gtaccagctcttggtttatctgaaagtgacaaacaatgcatacgagatcgtagctgcata
atggcacggcatattttggctgaccaaccagaagaatatatacaggctcaggtcaatacc
ttgttgcattcgcttgatattgacaaccgtatgagaggccctatgcatggacaataccca
gagctggagcagtactggaatcagtcccaaagttctatgggacctgcttcgatgcataat
gctgcagataaatggattaccgagtttggaaatcaaaataataacccagaaagttgggca
aattctttcgagcagcaatatggcccaaatggttgggcctccgagtttgaacagcatcag
tctcagatggccatgggtcagatgggaggagcgaacatggccagcctggctgctatggag
caatcccgtatgcttgcacaaacattagcaagtaataatgaccccaagtttcagaattct
aagttcttccagtttgtttcaaagatgagccgtggtgaacttattatagaagataatcaa
gtaaaacaaggttccgcatcccaatccaatggctgggctgatgaatttcaaacacagtac
aatgctaatgcaaacacatgggcggatcagtttgcacatgaagagctttcacaaggggcg
gataagtgggctagcgaattctctagtcaacataatcagggtgctctaaatgagagctgg
gttgatgagttttcaaaattaaatgtcactgatgaatgggcagaagaattcagtggaggt
ggttttggcgaaagctctgctgatccatgggcagatgagttccaagaacagttgtcatcc
ttcaaacaaagctcgggtgcttctcgaggggtttatgttttttctgagatgaacccttat
gttggtcaccctaatccaatgcaagaaggacaagagctcttccgcaagggcctcttaagt
gaagctgttcttgctttagaggctgaagttttgaagaatcctgataatgctgaaggttgg
aggttgctaggagtaacacatgcagaaaatgatgatgaccaacaggccattgcagcgatg
atgcgggcgcaggaagctaatccgacaaaccttgaagttcttctcgctcttggtgtcagt
cacacaaatgaattggagcagggagaagcattaagatatctttataggtggcttcagaat
catccaaaatatgggggccttgcccctccacagtctactgattcaccttatggtccagat
gttgttagattgtttaatgaagcagctcagatgtcacctgaagatgccgatgtccatata
gttctgggagtcttatacaacctatcaagagagtatgataaagctatagcttcatttaag
acagcactacagctcaaacctcaggactattcactctggaacaagcttggtgcaacccaa
gcaaacagcatccagagtgctgatgcaatactggcgtatcagaaggctctagacttgaaa
ccgaactatgtccgtgcatgggctaatatgggaatcagctatgccaaccagggtttgtat
gaagattccattcggtactatgtaagggcagttgcgatgaatccgaaagctgacaatgcc
tggcagtacttgaggatttctcttagcaatgcgtcacgagctgacatgattgctgcatgt
gatgcccgcaacctcgacgcccttcagaaagagtttcctctgtga
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