Setaria viridis (green foxtail): 117860428
Help
Entry
117860428 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117860428
03036 Chromosome and associated proteins [BR:
svs03036
]
117860428
Spliceosome [BR:
svs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117860428
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
117860428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
TPR_14
Pox_A12
Lsm_interact
ARM_TT21_5th
xRRM
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
117860428
NCBI-ProteinID:
XP_034599607
LinkDB
All DBs
Position
6:8363339..8371097
Genome browser
AA seq
834 aa
AA seq
DB search
MATEEEVPEAEAAAAVAPAPAGGGGDDAEMPDAAAPSGSDSDSSDSDDEGAGGVDELRIQ
ALERTLQEQPLDYETHVQYIQCLRKSGNIEKLRAAREEMNKYFPLTPKMWQEWAKDEISL
SMSEESFADIEKLYERGVQEYLSIKLWRDYLDYVEEHDPSVSQCTTSGLSKMRDLFERAI
TAGGLHVTEGSKLWAAYREYEMAILITISDDNDEERAKQVQRIRMLFHRQLSVPLAEMES
TLSEYKIWEAEQGNENDPGSNFDGVPSNVVSAYKKANDMYNERKQYEDQLSNAGASEADK
LQEFLKYLKFEESSGDPARVQVLYERAVSELPVSTDVWIGYTSYLDRTLKVPSVLRSVYH
RATRNCTWVGELWVHYLLSLERVRASEEELRNVFERAVQCSFPTIQEYLNIYLTRVHSLR
RRISDGLDFQLIRQTFKNAAEFLSPQLGTKELLHLNAYWAKLERSLGKDLSAARVVWENA
IKKSGSVLEVWQQYISMEVEMGHIHEARSLYKRCYSKRFAGSGSEDICHAWIRFEEEHGT
LDDYDLAVKKVTPRLKELMVFKSQEEAKVEAYSMLNDNSNADDSSQKRKASKMTNKQQPP
AKKRKENPPKSVKSSDDQEKTQSGHSGAVTAVEVGEASTEMKVDSNCRTGNTGSNEPKPS
FYNDKCTVFVSNIDLKATEDDLRRFFSDIGGATAIRLLKDKFTKKSRGLAYVDFSDNKHL
EAALQKNKHRLLGKKVSIARSDPSRSKKSREAGPSSKGYDNLPQSGDDGAKAPGSSRPEK
EVPKGDVKITGKNTAFAPRSVVKPLGWTTKDEKPDGGAGELKSNEEFRNLLLKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaagaggaggtgccggaggcggaggcggcggcggcggtggcgcccgcgcca
gctggtggaggcggggacgacgcggagatgcccgacgccgccgcgccctcgggctccgac
tcggactcgtcggactccgacgacgagggggcgggcggcgtcgacgagctccgcatccag
gccctagagcggacactccaggagcagcctctcgactacgagacccacgtgcagtatatc
cagtgtttgaggaagtcaggcaacattgagaagcttcgcgcggcaagggaagagatgaac
aagtacttccctcttaccccgaagatgtggcaggagtgggcgaaggatgaaatctcactg
agcatgagtgaggaatctttcgctgatattgaaaagctatatgagcgtggggtgcaagaa
tacctgtccattaagttatggcgggattaccttgactatgtcgaagagcatgatccatca
gtgtctcaatgtacaacgtctggcctctccaagatgagagatttgttcgagcgagccatc
actgcaggggggctgcatgttactgagggcagcaaactgtgggcagcttatagagaatac
gagatggcaattttgatcaccatcagtgatgacaatgatgaggaaagggcaaagcaagtt
cagcgtatacgcatgctattccaccgccagttatctgttcctttggctgagatggaatct
acactttctgagtataagatctgggaagccgagcaagggaatgaaaatgatccaggttcc
aattttgatggtgtcccctcaaatgtcgtatctgcttacaaaaaggccaatgatatgtac
aatgaaaggaagcaatatgaggatcaactaagcaatgcaggcgcatctgaagctgacaaa
ctgcaggagtttctgaaatatctcaaatttgaagaatcgtctggtgaccctgctcgtgtt
caagttctgtacgaacgagctgtttcagagctgcctgtttcaaccgatgtatggatagga
tacacgagctacctggatagaaccttgaaggtgccttctgtactaagaagtgtttatcac
agagccacaagaaactgtacatgggttggtgagctatgggtccattatctcttgtctttg
gagcgggttcgtgcttctgaagaagaactacgcaatgtatttgaacgggcagtacagtgt
tcttttccaaccatacaagagtatctcaatatttatctcactcgagttcatagtctaaga
cggaggatttcagatgggttggatttccagctgatcaggcagacattcaagaatgctgca
gaatttctctcacctcaactgggaaccaaggagttactgcacttgaatgcttattgggcc
aaattagagcgcagtcttggcaaagatctttctgcagctcgtgtcgtttgggaaaacgct
atcaaaaaaagtggctctgttttggaagtttggcagcagtacatttcaatggaggtagaa
atgggacatatacatgaggcgagatcgctttataagcgctgttatagcaaaagatttgct
gggtctggatcagaggacatatgtcatgcatggataagatttgaagaggagcatggcacc
ttggatgattatgaccttgctgtaaaaaaggtcacccctcggctaaaggagcttatggtg
ttcaagtctcaagaggaggctaaagtcgaggcttactctatgctcaatgataattctaat
gcagatgactcttctcagaaaagaaaagcaagtaaaatgaccaataaacagcagccccct
gctaagaaaaggaaagagaatccaccaaaaagtgtcaagtcatcagacgaccaagaaaag
acccaaagtggacatagtggtgctgttactgctgtagaggttggagaggcatccacagaa
atgaaagtggacagcaactgccgaacagggaatacaggttcaaatgaaccaaaaccatcc
ttctacaatgacaagtgcacagtatttgtctcaaatatagacttgaaggcaactgaggat
gaccttcgccggttcttctctgacattggtggtgccacagcaataagattgctgaaggac
aaattcaccaaaaagtcaagggggttggcctatgtggacttttcagacaacaagcatctt
gaggcagcccttcagaaaaacaagcataggttgcttggaaagaaagtgagtatcgctcga
tcagatccaagcaggagtaagaagagccgtgaggcaggtccttcctccaaaggctacgat
aacttgcctcagagtggtgatgatggtgcaaaagcacctggatccagtagaccagaaaaa
gaagtacccaaaggtgatgtgaaaatcacagggaagaacactgcttttgcaccacgatct
gtggttaaacctcttgggtggactaccaaggatgagaagccagatggtggtgcaggagag
ttgaaatcaaacgaggagttcagaaatctgttgcttaagaagtga
DBGET
integrated database retrieval system
