Setaria viridis (green foxtail): 117860458
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Entry
117860458 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117860458
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117860458
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117860458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-RING_5
Sina_RING
TerY_C
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_2
DUF2039
GAGA
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
117860458
NCBI-ProteinID:
XP_034599639
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Position
6:complement(32197954..32201399)
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AA seq
417 aa
AA seq
DB search
MGSFFSKENQPGGRQPHDYNHSHNQNNGAATASRGGKNRYAKIGDDYHTLEQVTDALAHA
GLESSNLIVGIDFTKSNEWTGKVSYNNRSLHAMGNTPNPYEQAISIIGRTLARFDEDNLI
PCFGFGDATTHDKSVFSFNHDKQPCDGFEQALSRYREIVPQLKLAGPTSFAPIIETAIGI
VDSSGGQYHVLLIIADGQVTRSIDTGNGRLSPQERETIDAIVKASDYPLSIVLVGVGDGP
WDMMRQFDDNIPSRAFDNFQFVNFTQIMSRPIPTSKKEAEFALSALMEIPEQFKAAMSLQ
LLGKRRGFPNRPVLPPPVSNQQQYSGFSAVKQTQSTSYSGCSAAKQTQSTGYGAAPKTPS
APREDSDIGDPQTCPICWNQAKNLAFGCGHQTCSDCAKDLKVCPMCQKVISVRLKLY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtttttctccaaggagaatcagcccggggggcggcagccgcacgactacaat
cacagccataatcagaacaacggtgccgcgactgcgagcagagggggcaagaatcggtat
gccaagatcggcgacgattaccacaccctggagcaggtcaccgatgcccttgcgcatgct
ggtctggagtcctcaaatctgattgttgggattgatttcacaaagagcaatgagtggaca
ggcaaagtgtcctacaataaccggagcttgcacgcaatgggaaacactccaaacccatat
gagcaggctatttccatcatagggagaacccttgcacgctttgatgaggataacctgata
ccatgctttggatttggcgacgcaactactcatgataagtcagtatttagctttaatcat
gataagcagccctgtgatggcttcgagcaagcactttctcggtacagagaaatcgttcca
caacttaagctggctggtccaacttcatttgcaccaatcattgagactgctattggaatt
gttgatagtagtggtggccagtatcatgtcctgcttataatagcagatggacaggttaca
cgcagcattgacacaggcaatggacggttgagcccacaggaaagggagaccatagatgcc
attgtgaaggctagcgattaccctctttcaattgtgcttgttggggttggtgatggacca
tgggacatgatgaggcaattcgacgacaacataccttctcgggcattcgacaattttcag
tttgtgaacttcacacagatcatgtctagacctatacccacaagcaaaaaggaggccgaa
tttgctctttcagcattgatggagatcccagaacagttcaaagcagcaatgagtctccag
cttcttggcaaacgaagaggatttcccaaccggccagtgttgcctccacctgtgagcaat
cagcaacagtactctggattttcagcagtcaaacagacccaatctactagctactctggc
tgttcagcagccaaacagacccaatctactggctatggagcagcaccgaaaaccccatcg
gcgcctcgagaggacagcgatataggtgatccgcagacctgtccaatctgctggaaccaa
gcgaagaaccttgctttcgggtgtggccatcagacgtgctccgactgcgcaaaggatctg
aaggtgtgcccgatgtgccaaaaggtgatctcggtgaggctgaagctctactga
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