Setaria viridis (green foxtail): 117860472
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Entry
117860472 CDS
T07951
Name
(RefSeq) peroxisomal ATPase PEX1
KO
K13338
peroxin-1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117860472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117860472
Membrane trafficking [BR:
svs04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117860472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
ATPase_2
AAA_14
AAA_5
AAA_22
ORC-CDC6-like
DUF815
RuvB_N
RNA_helicase
nSTAND3
Bac_DnaA
AAA_19
TsaE
AAA_7
IstB_IS21
AAA_28
AAA_33
Mg_chelatase
bpMoxR
RNA12
AAA_11
Rad17
Gln-synt_N
Motif
Other DBs
NCBI-GeneID:
117860472
NCBI-ProteinID:
XP_034599663
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All DBs
Position
6:complement(35906871..35913767)
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AA seq
1093 aa
AA seq
DB search
MSGGGMEVEVRVVGGARSCFVALPLHLIHALERTSASGDLPPVLALDLHGPAGGRWSLAW
SGAASRSRAIEVAQELAECISLPDGTIAQLSVTRSLAKADSVSIEPYSEDDWEILESRAD
LAEETILKQVGIVYEGMKFPLWLDGHNIVKFVVVSSYPEKSVVQLVPGTEVAVAPKNRKE
PSQDVKKQSALEEQVKTKALLRVQPADGKYTHTFKYKGVDIGVVLSYAVLIHPDTATSIS
VGNLQLVTVSPKSSKKGITQNSKEVAQKKGISVAKKRTHEAAVYILLSESVAKGHVMLPY
SIRHFISADVHSWVYIKTYSANITKDEPVVTISSLRFKMHVKDAHDNSELVSQETDTSRI
TRIPPENDDFFQEAHYGESKSLQDADIEGISESVSKHKFFIKHWLIGQLKEMGLHAGHTE
ISSIVLPANVVLHFEATYQKPNRGVELLYLLTFTSENSTFDNTQLKVETAWSAPIGNPEN
VELHFRKLELGEPVSFGSVMDSSSTDGFKLTQSSLGWMENAMSDVIKRLSVLLSSTSLRL
FNRLKFPFPGHVLVYGPRGSGKTALTRASAKYFEDHKEILAHVIYRDCSKLALGKAKETR
QAIEDSISEALLHSPSIIIFDDLDSVITVSSDPQVSQSSSSSDSLVRYLADIMDEYKDKT
QNTCGYGPIAFMASVQSLQSLPQDLTSSGRFDFHIELPALAAPERTALLKHQVEEHELQC
SGEVLSEIASKCEGYDAYDLEILVDRAVHAAASRFVLLSNASRNSLKPTLVMEDFSKAMH
GFLPVAMRDLRKYAPDDKDGGWEDVGGLNEAVTIIKETLELPSKYPNIFTRAPVRLRSNI
LLYGPPGCGKTHIVRAAAAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAVAAAPCLL
FFDEFDSIAPQRGTHSAGVSDRVVNQFLTELDGVETLTGVFVFAATSKPQLIDAALLRPG
RFDRLIFCDFPQWDERLEILKVHSRTVSLASDASLEDVASLTEGFTGADLAAILTDAGLA
AVHELLDNRENGVPESEPCISKELLMSVARKARPSTPADEKRRYDREFGEFVSSRKSVST
KARESKGKKVTLA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcgggatggaggtggaggtccgcgtggtgggcggcgcgcggagctgcttc
gtcgcgctcccgctccacctcatccacgccctcgagcgcacctccgcgtccggcgacctc
ccgcccgtcctcgcgctcgacctccacggccccgccggtggccgctggtccctcgcctgg
tccggcgccgcgtcccgatcccgcgccatcgaggttgcacaagagttggcagaatgcatt
tccctacctgacggaactatagcacagttgagcgtaacccgttctcttgccaaagctgac
tcggtcagtatagaaccctacagtgaggatgactgggagatactggagagccgtgctgat
ttggctgaagaaacaatcttgaagcaggtcggcattgtttatgagggtatgaaattccca
ttgtggttggatggccataatattgtgaagtttgttgtggtgtcatcatacccagagaag
tcagttgttcaacttgtgccaggaactgaagttgccgttgcacccaaaaatcgcaaagag
ccttctcaggatgtgaaaaagcaaagtgcactggaggaacaagttaaaacaaaggcactc
ctgcgtgttcaaccggctgatgggaagtatacacatacgttcaaatataaaggtgttgac
ataggggtggttctcagctatgctgtgctaatacaccctgatacagctacaagtatttcg
gttgggaatctccagttggtcactgtttcacctaaatcatcaaagaaaggaatcacccaa
aatagcaaagaagttgcacaaaagaagggaatttcagtagctaaaaaaaggacccatgaa
gctgccgtttatatcttactctcagaatcagttgccaaaggacatgttatgctcccctac
tctattcgtcacttcattagtgctgatgtacactcatgggtatatattaagacatactca
gctaatataacgaaggatgagcctgtagtgacaatatcttctttgaggttcaagatgcat
gtgaaagatgcccatgataacagtgaattagtcagtcaggaaacggacacttcgaggata
accaggattcctccagaaaatgatgacttcttccaggaagctcattatggtgaaagcaaa
agccttcaggatgcagatatcgagggcatttctgaatctgtatcaaagcataagtttttt
attaaacattggcttatcggacaacttaaagaaatgggtttacatgctggccacaccgag
ataagttcaatagttttaccagccaatgttgtgctccattttgaggcgacataccaaaaa
ccaaacagaggagttgaattactgtaccttctcacatttacttctgaaaattctactttt
gacaatacacaactcaaggttgagactgcttggagtgctccaatcggcaatccagaaaat
gtggaactgcatttcaggaagttggagttgggagagcctgtatcttttggttccgtaatg
gatagtagttccactgatggcttcaagctgacacaatcttctttgggctggatggagaat
gcaatgtcagatgtgataaaaagattatctgtactcttatcgtcaacaagcctgaggtta
tttaacagactaaagttcccctttcctggacatgttcttgtctatgggcctcgaggttct
gggaaaactgctttgaccagggcttctgcaaaatactttgaagatcataaagagattttg
gcacacgtaatatacagagattgttccaaacttgcccttggcaaggctaaggagacaagg
caagcaattgaagacagcatttctgaagcgctgcttcattcaccttcgatcatcatattt
gatgatctggacagtgtaattacagtctcttcagatcctcaagtgtctcaatcatccagt
tcttctgattctctagtaaggtatttggctgacattatggatgaatacaaggataagact
caaaatacatgcgggtatggacctattgcgtttatggcttcagttcaatcacttcagagt
cttcctcaagacttaacctcttctgggagatttgatttccacattgagcttcctgctctt
gcagcccctgagcgcacagcactactaaaacatcaagttgaggagcatgagttgcagtgt
tctggggaagttctatctgagatagcatcaaaatgtgaaggttatgatgcgtatgacttg
gaaattttggttgatagggctgtgcacgctgctgcttctcgctttgttctgctttctaat
gcctctcggaactctctgaaaccaactttggtgatggaagatttctcaaaagcaatgcat
ggcttccttccagtcgccatgcgtgatcttagaaaatatgctcctgatgataaagatggt
ggttgggaagatgttggaggtttaaatgaagcagtaactattattaaagagactcttgaa
ttgccatccaaatacccaaatatctttaccagggcacctgtacggttgcgatcaaacatt
ctcctgtatggaccacctggatgtggcaaaactcatattgtgagagctgcagccgcagct
tgttctttgcgattcatttcagtcaagggtccagagttattgaataagtacattggttca
tctgagcaatctgttcgtgacttttttgcaaaggcagttgcagcagcaccttgcctgcta
ttctttgatgaatttgactccattgcaccccagcgaggaacccatagtgctggagtttct
gatcgtgttgttaatcagttcttgacagaactagatggtgtggaaaccttgactggagta
tttgtatttgcagctaccagcaagccgcaactaattgatgccgctctcctgcgacctgga
aggtttgatcgtctaatcttttgtgatttccctcaatgggatgaacgtttggaaattctg
aaggttcattctaggacggtttcgcttgcaagtgatgccagtctggaagatgttgcttct
ctgactgaaggatttactggtgctgatctcgccgctattctaacggatgctgggttggca
gcagttcatgaacttttggacaaccgggagaacggggtcccagaaagcgaaccgtgcatc
agcaaagaacttcttatgtctgtcgctaggaaggctagaccttctacacctgcagacgag
aagaggcggtatgatagggagtttggtgaatttgtgtcatccaggaagtctgtttccaca
aaggcaagagagtcgaaaggcaaaaaggtcacactagcctga
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integrated database retrieval system
