Setaria viridis (green foxtail): 117860513
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Entry
117860513 CDS
T07951
Name
(RefSeq) putative aconitate hydratase, cytoplasmic
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00020
Citrate cycle (TCA cycle)
svs00630
Glyoxylate and dicarboxylate metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
svs01210
2-Oxocarboxylic acid metabolism
svs01230
Biosynthesis of amino acids
Module
svs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
svs_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
svs_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
117860513
00630 Glyoxylate and dicarboxylate metabolism
117860513
Enzymes [BR:
svs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
117860513
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Acyl_transf_2
HypD
Motif
Other DBs
NCBI-GeneID:
117860513
NCBI-ProteinID:
XP_072150597
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All DBs
Position
6:3021413..3028710
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AA seq
983 aa
AA seq
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MYKAASARLLLRSLSSSAPVPGKSRLAAARLALPRPRVAGPARSTAAAAAAAWRWSGTGA
RFAGARAQIGAAVPAVERLQRRMATQATEHAFKNILTSLPKPGGGEYGKFYSLPALNDPR
IEKLPYSIRILLESAIRNCDNFQVTTNDVEKIIDWENTSPKLAEIPFKPARVLLQDFTGV
PAVVDLAAMRDAMAKLGSDANKINPLVPVDLVIDHSVQVDVARSPNAVQLNMELEFSRNK
ERFSFLKWGSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTDGILYPDSVVGTDSHTTMI
DGLGVAGWGVGGIEAEATMLGQPMSMVLPGVVGFKLTGKLRSGVTATDLVLTVTQMLRKH
GVVGKFVEFYGEGMGKLSLADRATIANMSPEYGATMGFFPVDHVTLDYLKLTGRSDETVS
MIEAYLRANKMFVDYNEPQPERIYSSYLELDLDEVEPSISGPKRPHDRVPLKDMKSDWHA
CLDNKVGFKGFAVPKEQQGKVVKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGL
VAKKACELGLEVKPWVKTSLAPGSGVVTKYLLQSGLQEYLNQQGFHIVGYGCTTCIGNSG
DLDESVSAAISENDVVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFE
KEPIGIGKDGKEVYFRDIWPSTEEVAQVVQSSVLPDMFKGTYEAITKGNPMWNQLTVPEA
SLYSWDPKSTYIHDPPYFKDMTMSPPGPHAVKDAYCLLNFGDSITTDHISPAGSIHKDSP
AAKYLMERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKFLNGEVGPKTIHVPTGEKL
SVFDAAMRYKSEGHATIILAGAEYGSGSSRDWAAKGPMLLAIKAVISKSFERIHRSNLVG
MGIIPLCFKAGEDADSLGLTGHERYSIDLPTNLSEIRPGQDVTVRTDNGKSFTCTLRFDT
EVELAYFNHGGILPYVIRNLAQN
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagccgcctccgcccgcctcctcctcagatccctctcctcctccgcacccgtg
cccggcaagtcccgcctcgccgccgcccgcctcgccctcccgcgtccccgcgtcgccggg
cccgcgcgcagcaccgccgccgccgccgccgccgcctggaggtggtccgggaccggggcg
cgcttcgccggcgccagggcgcagatcggggccgccgtgcccgccgtcgagcggctccag
cgcaggatggccacccaagcaactgagcatgccttcaagaatattctgaccagcctccct
aagcctggaggtggtgaatatggaaagttctacagccttcctgcgctaaatgatccaagg
attgagaaactgccctactccatccgtattcttcttgagtcggctatccgcaactgtgat
aacttccaagttaccacgaatgatgttgagaaaatcattgattgggaaaacacatctcca
aagctggctgagataccatttaagccagcacgtgttcttcttcaggacttcactggagtt
ccagctgttgttgatcttgcagctatgcgtgatgcaatggccaagttgggaagtgacgcc
aacaagatcaacccattggtcccagtggatcttgttattgatcactcagtgcaggtggat
gtagcaaggtcgccgaatgctgtgcaattaaacatggaactggagtttagccgcaacaaa
gaaagattcagtttccttaaatggggctctactgctttccaaaatatgctggttgtcccc
cctggttctggtatcgtgcaccaggtcaatcttgagtaccttggccgagttgttttcaac
acagatggcattctctatcctgacagcgtagttggtactgattcacacaccactatgatt
gatggtttgggtgttgctggatggggggttgggggtattgaagctgaggctacaatgctt
ggtcagccaatgagcatggttttgcctggtgtggttggcttcaagttgactggaaagtta
cgtagtggtgtcacggctacagaccttgttcttacagtgacacaaatgctaaggaagcat
ggtgttgttggcaagtttgttgaattctatggtgaaggtatgggaaagctatctttagct
gacagggccacaattgcaaacatgtcaccggaatatggagctaccatgggcttctttcct
gtagatcacgtgacattggattaccttaaactgacaggccgtagcgatgaaactgtgtcg
atgattgaagcatatctgcgagccaataagatgtttgtggactacaatgagcctcaacca
gaacgaatttactcgtcttatcttgagctggaccttgatgaggtggagcctagcatatct
ggcccaaagaggcctcatgaccgtgtcccgttgaaggatatgaaatcagattggcatgct
tgcctagacaacaaagttgggttcaagggttttgcagtgcctaaggagcagcagggtaaa
gttgtcaaatttgacttccatgggcagccagcggaacttaagcatggtagtgttgttata
gcagcaataactagctgcacaaacacctcaaatcctagcgttatgcttggtgctggcctt
gtagctaagaaagcctgcgagttgggtctcgaggtgaaaccatgggtgaagactagcctt
gcccctggatcaggagttgtcacaaagtacttgcttcagagtggtcttcaagaatacttg
aaccagcaaggattccatatcgttggttatggatgtaccacttgcattggaaactctggt
gatcttgatgagtctgtatcagctgctatttcagaaaatgatgttgtcgctgctgctgtt
ttgtcgggcaaccggaacttcgagggtcgtgtgcaccctctgactcgggctaactacctt
gcttcgccacctcttgttgttgcttatgcacttgctggcactgttgacattgattttgag
aaagagcccattggaattggaaaagatggcaaggaggtctacttcagggatatatggccc
tcaactgaagaagttgcacaggtcgtccaatccagtgtgctgcctgacatgttcaagggc
acctacgaggctatcacgaaagggaacccaatgtggaaccagcttactgtcccagaagca
tcactctattcatgggatccgaaatccacttacattcatgatcccccgtactttaaggac
atgaccatgtccccacctggtccccatgcagtgaaggacgcctactgcttactgaacttc
ggggacagcattacaacagatcacatttcacctgccggaagcatacacaaagacagtcct
gctgccaagtatttgatggagcgtggtgtggacaggaaggacttcaactcatatggtagc
cgtcgtggtaacgatgaagtaatggcgagaggaacatttgcaaacattaggattgtgaac
aagtttttgaacggagaagttggacccaagaccattcacgttcctactggggaaaagctt
tctgtttttgatgcagccatgagatacaaatctgagggccatgccaccataattcttgct
ggcgccgagtacggaagtggcagttctcgtgattgggctgccaagggaccgatgctcctg
gcaattaaagctgtgatttccaagagctttgagcgtatccacagaagcaatttggtgggg
atgggaatcattcctctctgcttcaaagctggtgaggatgctgattctcttgggcttact
ggacatgagcggtacagcatcgaccttcctaccaacctcagcgagatccgccctggccag
gacgtgactgtcaggaccgacaacgggaaatccttcacttgcacccttcgctttgacact
gaggtggagctggcatacttcaaccatggaggcatcctcccctacgtcatccgcaacttg
gcacagaactaa
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