Setaria viridis (green foxtail): 117860628
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Entry
117860628 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K03505
DNA polymerase delta subunit 4
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03030
DNA replication
svs03410
Base excision repair
svs03420
Nucleotide excision repair
svs03430
Mismatch repair
svs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117860628
03410 Base excision repair
117860628
03420 Nucleotide excision repair
117860628
03430 Mismatch repair
117860628
03440 Homologous recombination
117860628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svs03032
]
117860628
03400 DNA repair and recombination proteins [BR:
svs03400
]
117860628
DNA replication proteins [BR:
svs03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
117860628
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
117860628
MMR (mismatch excision repair)
DNA polymerase delta complex
117860628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_delta_4
Nha1_C
Motif
Other DBs
NCBI-GeneID:
117860628
NCBI-ProteinID:
XP_034599867
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All DBs
Position
6:4039174..4040110
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AA seq
121 aa
AA seq
DB search
MTRGGDMKSFFRQQKAHAATKPTGGVSKKTAAAAAAHHHQKAAPALHVNAATDHGRQQEE
AEAEERERAARSFDMDMRYGPCLGLTRAQRLRRAAALGLAPPPALLALCTDDQPCLWEGR
V
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggggcggcgacatgaagtccttcttccggcagcagaaggcgcacgccgccacc
aagccaaccggcggcgtctccaagaagacggcggcggcggcggcggctcaccaccaccag
aaggccgcgcccgccctccacgtcaacgccgccacagatcacgggcgccagcaggaggag
gcggaggcggaggagcgggagcgggcggcccggtcgttcgacatggacatgcggtacgga
ccctgcctcggcctcacccgcgcccaacgcctgcgccgcgccgccgcgctcgggctcgcc
ccgccgccggcgctcctcgctctctgcacggacgaccagccctgcctctgggagggacgc
gtctag
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