Setaria viridis (green foxtail): 117860653
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Entry
117860653 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117860653
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
117860653
TFIIIC, fungi type
117860653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_8
TPR_14
TPR_7
TPR_2
TPR_1
TPR_16
TPR_17
ANAPC3
TPR_CcmH_CycH
TPR_12
TPR_9
TPR_11
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_15
ARM_TT21_4th
HEAT_Nup120
ARM_TT21_2nd
ARM_TT21_C
Alkyl_sulf_dimr
SNAP
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
117860653
NCBI-ProteinID:
XP_034599912
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Position
6:1958886..1971919
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AA seq
910 aa
AA seq
DB search
MSAVTEDGVQRASAAEVGDGGRDGDEDFEEDEEDGFEFDDAEEAMQCVEMAGRSTGAGAM
RAQAHDYEALAERKRKALAEEQPQREGSKRPRPDDLSEAEAATMFDQLMEGFGLRRKRRS
KDGKKRGRKKGTKNKGSPEVIKKLGDATLLFAEEKFNEAIPILHEIVRIAPNLPDSYYLL
GSIYSETGELDKAINFLMLAAYVSPKDASLWKKLIPLAKKKEDASLARHCILKAMRADPE
DVDLKYLCGDMYRNLRDYQKAAEIYEQIVRIYPANVAVRKVAAQMYRECGQIDKAINLLE
DYVSTQTTNIDWSVLDLLISLYLRNNALSEALKQIEKARLQLRSQQKLPIQLLAKEVICH
AYLGDMKHAEIFLRDVHLEPSKDNTDVIKELATNLETMGLYEYAVKFYLMIGDVANHNAG
SLYVDHKEMGNSYVKVAQCYMVLGDKRNAIPYFYKALQSMKDNIDIRLTLSSLLIDEGKT
DEAVTLLSPPKNQELHSANTPDQHKPWWCDGKVKMKLANIYYNKGNLEDFVDTIFHPILE
TLNVEYANRKIKPMRKLPNTVLHERVKVLGEPRPDSIFQGLRPIASPGELQKANRAKKLI
EKRAASNEELKPNDLRRTKQVPPVPDLLTNMEHHQLVLNLCRTLALLQRYWDALQIINRT
LKLGNDVLTNDNKEELRSLGAQIAYRAPDPSHGFKYVRYVVQQHPYSLSAWNSYYKVISR
IEDRFPHHFKYILRTREEKPDCVPPIIISGHRFTAISQHQSAARDYLEAYKLDPENPLIN
LCVGTALISLALGFRLQNKNQCIVQAFAFLYRYLRLCGESQEALYNIARAYHHIGLNTLA
AVYYEKALAVEEEDHPIPKLPYEAGSCAQEDLRPGYCDVRREAAFNLHLIYKKSGATDLA
RQILKTYCTV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgtgacggaggacggcgtccagcgagcctccgccgcggaggtgggcgatggc
gggcgcgacggtgatgaggatttcgaggaggatgaggaggacgggttcgagttcgatgac
gccgaggaggcgatgcagtgcgtggagatggcggggcgcagcaccggcgccggagcgatg
cgtgcccaagcacacgactacgaggcgctcgcggagcgcaagcgcaaggctctcgccgag
gaacagccccagagggagggttccaagaggccaaggccggatgacctttcagaagcggaa
gcagcaaccatgttcgatcaactcatggaaggctttggtcttcggcgcaaaagaaggtcc
aaagatggcaagaaaaggggaagaaagaaaggaacaaagaataagggcagccctgaagtt
attaaaaagttgggtgatgctactctactttttgctgaagaaaaatttaacgaggcaatt
cctatactgcatgagattgtgcgaattgcaccaaatttgccagattcatattatctactt
ggtagcatttatagtgagactggtgaactagataaagccataaacttcttgatgcttgct
gcatatgtctccccaaaggatgcatcgctgtggaagaaactcattcccttggccaagaaa
aaagaagatgcctctctggcaagacactgcattttaaaagcaatgagagcagatccagaa
gatgtagatctgaagtatctttgcggtgatatgtatcgcaaccttcgtgactatcagaaa
gctgcagagatatatgagcagatagttagaatttatcctgccaatgttgctgttcgtaaa
gtagctgcgcagatgtacagagagtgtggtcaaattgacaaagctattaatttgttggaa
gactatgttagtactcaaactaccaacattgactggagtgttctagatttgttgatatcc
ctttatctgagaaataatgctcttagtgaagcattaaagcagattgagaaggcacgccta
cagttgcgatctcaacagaaattaccaatacaattgctggcgaaggaagtaatctgccat
gcctatcttggagacatgaaacatgctgagattttccttcgtgatgtgcatttggagcca
tcaaaagataacactgatgtgatcaaggagctcgcaaccaatttagaaaccatgggacta
tatgagtatgcagtaaagttttacctgatgattggagatgttgctaatcataatgcgggt
agtttatatgtggatcacaaagaaatgggtaattcatatgtcaaagtcgctcagtgctac
atggtcttaggggacaaaagaaatgcaattccttatttttataaagccttacaaagcatg
aaggacaatatcgatatacgattgaccttatcctcccttcttattgatgagggcaagact
gatgaagctgtcactttgctttctcctcccaaaaatcaagagttgcattctgctaatact
ccagaccaacataaaccttggtggtgtgatggaaaagtaaagatgaagctagcaaacatt
tattacaataaagggaacctggaagactttgtggatacaatttttcatcctattctagaa
acattgaatgttgagtatgctaatcgaaagatcaagccaatgagaaagcttccaaatact
gttctgcatgaaagagttaaagtattgggggaaccacgtccagatagtatatttcaagga
ttaaggccaatagcgtcacctggggagttacaaaaggcaaacagagcgaagaaacttata
gagaaaagagcagcttcaaatgaggaattaaaacctaatgatttgcgaagaacaaagcaa
gttcctcctgttcctgatctgttgacaaatatggagcatcatcaacttgtgttaaatctt
tgtcgaacattagctttgcttcagcgatattgggatgcactgcagattatcaaccgcact
ctgaaacttggaaatgatgtgctcaccaatgacaacaaagaggagctcagatccttgggt
gctcaaatagcttatagggctccagatcccagtcatggcttcaagtatgttcgatatgtt
gttcagcagcacccatattctctctctgcttggaattcctactacaaagtgatatcaaga
atagaggacaggtttccacatcatttcaaatatattcttcggacaagagaagaaaagcct
gactgtgttccccctataatcatatccgggcatcgattcactgctataagtcagcatcag
tcagctgcccgggattacctggaagcttataagttggacccagaaaaccctcttattaat
ctctgtgtaggcactgccctgattagtttagctcttggcttcaggcttcagaataagaac
cagtgcatcgtccaagcttttgcattcctatatagatacctgcgcctttgtggggaaagt
caggaagccttgtacaacatcgctcgggcataccaccacattggcctgaataccttggca
gctgtttactacgagaaggctttagcggttgaggaggaagatcatcctattcccaagctt
ccatacgaggctggttcatgcgcacaggaggatctgaggccagggtactgtgacgtacga
agagaggctgccttcaacttgcatctaatctacaagaaaagcggtgcgacagatcttgct
aggcagattctgaaaacgtactgcactgtttag
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