KEGG   Setaria viridis (green foxtail): 117860769
Entry
117860769         CDS       T07951                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117860769
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117860769
   03041 Spliceosome [BR:svs03041]
    117860769
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117860769
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117860769
Spliceosome [BR:svs03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117860769
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35
Other DBs
NCBI-GeneID: 117860769
NCBI-ProteinID: XP_034600035
LinkDB
Position
6:complement(32114978..32118508)
AA seq 385 aa
MGKAETRTRGRGGGGGGGGGGGDGGGNPGKIFVGGLPRDTTDATFVRHFGQYGEIVDSVI
MKDRHTSQPRGFGFITYSDPAVVDKVIEETHVINGKPVEIKRTIPKGAMQSSSKDFKTRK
IFVGGLPSALTEDDFKNFFARYGTVVDHQIMFDRETKRSRGFGFIVFASEDVVDDLLANG
NMIDLAGSKVEIKKAEPKKSSNPPPSGRGRSSRSSYDSGSRDHPSVDNYGGLTNAYGSYS
GGGFGPYRSDAGFSASRLGSYGGMGEFGVGYGRYYAGLGAYGAASSFGYPSRFGLYGGGF
GGAYAGGDLSGYRRTVADESFGAPGSSGFGGDADQSFGAPGSSGFGGATYGGAYDPALGG
YASASTPDGNKGSFAGGYGRYHPYG
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggggaaggcggagacgagaaccagggggcgcggcggcggaggcggaggcggaggcggc
ggcggcgacggcggtggcaacccggggaagattttcgtcggggggctgccgcgggacacc
acggatgctacatttgtgaggcattttggccagtatggagaaatagttgattcagtaata
atgaaagataggcacacatctcagccacggggtttcggcttcattacatactctgaccct
gctgttgttgataaagtgatagaggaaactcatgtcatcaatggaaagccagttgagatt
aaaagaacaataccaaaaggtgcaatgcagtctagctctaaggatttcaagactagaaag
atatttgttggtgggcttccctcagcactaactgaagatgatttcaagaatttctttgca
agatatgggactgtggtagaccaccagattatgtttgatcgtgaaacaaaacgctctaga
ggctttggatttatagtttttgcttctgaggatgttgtagatgatttattagcaaacgga
aatatgatcgatcttgctggttcaaaggtggagatcaagaaagcagaaccaaagaaatcc
tcaaatccacctccatcagggcgtggtagaagttctaggtcttcatatgatagtggctct
agggaccacccttctgttgataactatggtggattgaccaatgcttatggcagttacagt
ggtggtggatttggtccttataggagcgatgcaggtttcagcgctagtaggctcggcagc
tacggtgggatgggtgagtttggtgttggatatggtcgttactatgcaggattaggggcc
tatggagctgcatcttcgtttggttatcccagtcgctttgggttatatggaggaggtttt
ggtggagcttatgctggtggagacttgagtggctatagacgcactgttgctgatgagagc
tttggcgcccctggtagttctggctttggtggtgatgctgatcagagctttggtgcccct
ggtagttctggctttggtggtgccacctatggtggggcatatgatcctgctctaggtggt
tatgcatctgctagcacacctgacgggaataaggggagctttgctggtggatatggacgg
tatcacccatatggatga

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