Setaria viridis (green foxtail): 117860871
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Entry
117860871 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15026
translation initiation factor 2A
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117860871
03012 Translation factors [BR:
svs03012
]
117860871
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117860871
Translation factors [BR:
svs03012
]
Eukaryotic type
Initiation factors
eIF-2A
117860871
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eIF2A
WDR55
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
117860871
NCBI-ProteinID:
XP_034600172
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Position
1:29917080..29921202
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AA seq
525 aa
AA seq
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MASLPPALEILVREPDGFTLWSGPPYPPGTTSPTHRIPKTACSATSFSADGARLLATVAS
ASATVYDCRTLAVVRRFELPGLLAAALSPTGAYLQTFQKSSSPQEKNVTVWHVDTAVALY
QHYQKSMSKATWPMIQFSADESVGCRMMPNEIQFFDPKDFTKGVLSRIRMPGIAAMQLAT
APGSHVAGFVPEAKGVPASVQIFSCNKDAQNQAVARRSFFRCSTVQLHWNKGSTGLLVLA
QADVDKTNQSYYGETKLNYLTTDRAFEGIVPLKKDGPVHDVQWSSSGSEFAVVYGFMPAK
ATIFNKKCNPLLELGEGPYNTIRWNPKGRFIVLAGFGNLPGDMAFWDYSEKKLVAKTKAE
CSVTSEWSPDGRHFMTATTAPRLQIDNGIKIFDHNGSLQFKKMFERLYQADWKPEAPERF
GDIADLTTSLSSLRIEETKKQGSASAQGSKSAQTSSKAPVSTASKPTAYRPPHAKGSAEV
QNKLFGGLAPAGGEMSKNALRNKKRREKQKEKKAAEASGSPADES
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctaccgcctgccctcgagatcctagtgcgcgagcccgacggcttcacgctg
tggtccggcccgccctacccgccgggaaccaccagcccaacgcataggatccccaagacg
gcgtgcagcgccacctccttctctgccgacggtgcccgcctcctcgcgacggtggcctca
gcctcggccactgtttacgactgccgcacgctcgccgtcgtcaggcgcttcgagctcccg
ggcctcctcgccgccgcgctgtcgccgacgggggcgtatctgcagaccttccagaagtcg
tcctcgccgcaggagaagaatgtcacggtctggcacgtcgacaccgccgtcgctctctac
caacactaccagaaaagcatgtctaaggccacctggccaatgatccagttttctgcggat
gagtcagtcggttgccggatgatgcctaatgagatacagttctttgatccaaaagatttc
acaaaaggggttttgagtaggataagaatgcctggcatagctgcaatgcagctagcaact
gctccaggatctcatgttgctggatttgtcccagaggctaagggtgttccagccagtgtt
cagatattttcttgcaacaaggatgcacaaaatcaagctgttgctcgcaggagctttttt
cggtgttccactgttcaattacactggaacaaggggtctactggactacttgttcttgct
caggctgatgtagataaaaccaaccagagttactatggtgaaactaagttgaactacttg
acaactgacagggcctttgaaggaatcgttcctcttaaaaaggatgggccagtgcatgat
gtgcagtggtcttcttcgggctctgaatttgcggtggtttacggatttatgccggccaag
gcaacaatattcaacaaaaagtgcaaccctcttcttgagcttggtgaaggaccttacaat
accataagatggaaccccaaaggacgatttatcgtgttagcaggatttggtaatttgcct
ggtgatatggcattctgggattattcagaaaagaaattggttgcgaaaacaaaggcagaa
tgttctgttacaagtgaatggtcccctgatggtcgtcactttatgactgctacaacagct
ccaagactccaaatagacaatgggataaaaatatttgaccacaatggatctttgcagttt
aagaagatgtttgaaaggctgtatcaggctgattggaagcctgaagcacctgaaagattt
ggggacattgctgacctgacaacatctttgagcagcttaaggattgaagaaacaaagaag
caaggttctgcttcagcacaaggttccaaatcggcacaaacatcaagcaaggcccctgtt
agtacagcgtcaaaacctacagcataccgtccacctcatgcaaaaggttctgcagaagtt
cagaataagctttttggcggacttgctcctgcagggggagagatgagcaagaatgcgttg
agaaacaagaagcgcagagagaaacagaaggagaaaaaggctgctgaagcgtcgggctct
cctgctgatgaaagctga
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