Setaria viridis (green foxtail): 117860957
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Entry
117860957 CDS
T07951
Name
(RefSeq) protein mago nashi homolog 1
KO
K12877
protein mago nashi
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
svs03015
mRNA surveillance pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117860957
09122 Translation
03013 Nucleocytoplasmic transport
117860957
03015 mRNA surveillance pathway
117860957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117860957
03041 Spliceosome [BR:
svs03041
]
117860957
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117860957
Spliceosome [BR:
svs03041
]
Complex C
Other components
EJC/TREX
117860957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
117860957
NCBI-ProteinID:
XP_034600290
LinkDB
All DBs
Position
6:466219..469028
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AA seq
160 aa
AA seq
DB search
MASGGGDNGGGAGDAEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRK
EVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLV
DVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggcggcggcgacaacggcggcggcgcgggcgacgccgagttctacctgcgg
tactacgtggggcacaagggcaagttcgggcacgagttcctcgagttcgagttccgcccc
gacggcaagctccgctacgccaacaactccaactacaagaacgacaccatgatccgcaag
gaggtcttcgtctccccatccgtcctccgcgaggccaggaggatcatccaggagtccgat
attatgaaggaggacgacagcaactggccggagcccgaccgcatcgggcgccaggagctc
gagatcgtcatgggcaacgagcacatctccttcaccacatccaagatcggctccctcgtc
gatgtccagtccagcaaggacccggagggcctccggatcttctactacctcgtccaggat
ctgaagtgttttgtgttttcactcatcaacctccacttcaagatcaagccgattcagtcc
tga
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