KEGG   Setaria viridis (green foxtail): 117860957
Entry
117860957         CDS       T07951                                 
Name
(RefSeq) protein mago nashi homolog 1
  KO
K12877  protein mago nashi
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03013  Nucleocytoplasmic transport
svs03015  mRNA surveillance pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117860957
  09122 Translation
   03013 Nucleocytoplasmic transport
    117860957
   03015 mRNA surveillance pathway
    117860957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117860957
   03041 Spliceosome [BR:svs03041]
    117860957
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117860957
Spliceosome [BR:svs03041]
 Complex C
  Other components
   EJC/TREX
    117860957
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 117860957
NCBI-ProteinID: XP_034600290
LinkDB
Position
6:466219..469028
AA seq 160 aa
MASGGGDNGGGAGDAEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRK
EVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLV
DVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcgagtggcggcggcgacaacggcggcggcgcgggcgacgccgagttctacctgcgg
tactacgtggggcacaagggcaagttcgggcacgagttcctcgagttcgagttccgcccc
gacggcaagctccgctacgccaacaactccaactacaagaacgacaccatgatccgcaag
gaggtcttcgtctccccatccgtcctccgcgaggccaggaggatcatccaggagtccgat
attatgaaggaggacgacagcaactggccggagcccgaccgcatcgggcgccaggagctc
gagatcgtcatgggcaacgagcacatctccttcaccacatccaagatcggctccctcgtc
gatgtccagtccagcaaggacccggagggcctccggatcttctactacctcgtccaggat
ctgaagtgttttgtgttttcactcatcaacctccacttcaagatcaagccgattcagtcc
tga

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