Setaria viridis (green foxtail): 117861081
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Entry
117861081 CDS
T07951
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00520
Amino sugar and nucleotide sugar metabolism
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117861081
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117861081
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
117861081
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117861081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
117861081
NCBI-ProteinID:
XP_034600441
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All DBs
Position
6:19270386..19275012
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AA seq
650 aa
AA seq
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MVRTRRRSVLLLLLALTVLSPLALYTSSLSAALNPTQTRDFPGEITNQGRGVKADKLNAL
PLETVSSLKEPVGIVFSEELDGLAKESTGSEGQGAELPLRKAGEHKSRVLSEVMVAADGT
EVIEQVTRREAQDGGSASAISDEQEKTTGSQQQSSSKESLRETMPKQTSAKVLVENSQAA
ITDGKTKNTVLPDTRIRNIKDQLIKAKVYLGLGSIRANSQYLKDLRQRIREVQKVLGDAS
KDTDLPKNANEKVKALEQLLIKGKQMQDDCSIVVKKLRAMLHSAEEQLHAHKKQTVFLTQ
LAAKTLPKGLHCLPLRLANEYFSLDPGQQQFPNQHKLSNPKLYHYALFSDSILATAVVVN
STVLNAKHPSDHVFHIVTDRLNYAPMRMWFLTNPPGKATIEVQHIGEFTWLNDSYSPVLQ
QLGSQSMIDYYFGTNRAKPDSNLKYRNPKYLSILNHLRFYLPEIYPKLDKMVFLDDDIVV
KKDLTGLWSINMKGKVNGAVETCGESFHRFDHYLNFSNPVIAKNFDPHACGWAFGMNVFD
LAEWKRQNITQIYHSWQKLNQDRSLWKLGTLPPGLITFWNKTFPLSRSWHVLGLGYNPHV
NSRDIERAAVIHYNGNMKPWLEIGLPKFRSYWSRYLDYDQHFLRECNINP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggacgaggaggaggtcggtgctgctgctcctcctcgccctcacggtgctctcc
ccgctcgcgctctacaccagcagcctctctgcggcgctcaaccccacccaaacgcgggat
ttccctggagaaatcacgaatcagggccgtggcgtcaaggcagacaagctgaatgcgctt
cctctggaaactgtgagctctttgaaagaacctgtcggcatcgtcttctcggaggaactg
gacgggctggcgaaagaatcgactggatccgagggccaaggtgcggaattgccattgagg
aaggcaggggagcacaagagccgcgtgctctctgaagtcatggtggctgctgatggcacc
gaagtgatcgagcaagtgacgaggcgggaggcacaggatggtggctcggcgagtgccatc
tcagatgagcaggagaaaaccaccggatcacagcagcaatcgtcttctaaggaaagttta
cgggagactatgcctaaacagacatctgctaaggttcttgtggagaactcccaagcagct
ataacagatggtaaaactaagaacactgttttgcctgatacgcggatccgaaatatcaag
gatcagttaatcaaggcaaaggtctaccttggccttggatccattagagcaaattcgcag
tacctaaaagacttgcggcagaggatacgagaagttcaaaaggtgcttggtgatgcatcc
aaggacactgatctaccaaagaatgcgaatgagaaggttaaagcgctggagcagttgctg
attaagggcaaacagatgcaggatgattgttctattgttgtcaaaaagcttcgagctatg
cttcactcagcagaggagcagctgcatgctcacaagaagcagactgtttttctgacacaa
cttgcagctaaaacccttcctaaaggtcttcactgcctccccttgaggctggctaacgaa
tacttttccttggatcctggtcagcagcagttcccaaaccaacataaactcagtaaccca
aaactgtatcattatgccttgttctcggatagtatactagcaacagcagttgttgttaat
tcaacagtgttaaatgccaagcatccttctgatcatgtcttccacatagtaactgacaga
ctgaattatgcgccaatgagaatgtggttcctcactaatcctcctgggaaagcaacaatt
gaagtacagcatattggggagtttacatggctaaatgacagctacagtccagtgctccaa
caacttgggtctcaatccatgattgattactacttcggaaccaatcgcgcaaaaccagat
tcgaacttgaaataccggaatccaaaatatctgtcaattcttaatcatttgcgattttac
ctacctgagatttatccaaagctcgacaagatggtctttcttgatgatgatatagtagtt
aagaaggatctgactggcctctggtcaatcaatatgaaggggaaggtaaatggtgctgtt
gagacttgtggagagagcttccatcgcttcgatcattatctgaatttctcaaatcctgtt
attgccaagaactttgacccccatgcttgtggttgggcttttggaatgaatgtgtttgat
ctggctgaatggaagcggcagaatataacccaaatctatcactcatggcagaagcttaat
caagacagatcactttggaaacttggcacactccctccaggtttgatcacattctggaac
aagacattccccctgagccggtcatggcatgttcttggtctaggttacaatccccatgta
aacagcagagacattgagcgagctgcagtcatacattacaatggcaacatgaagccctgg
ctagagattggcctgccaaagttccgaagctactggtcgaggtatctggactatgaccaa
catttcctgcgggaatgcaacatcaatccatga
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