Setaria viridis (green foxtail): 117861210
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Entry
117861210 CDS
T07951
Name
(RefSeq) isoamylase SU1, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00500
Starch and sucrose metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117861210
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
117861210
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Gene cluster
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
117861210
NCBI-ProteinID:
XP_034600622
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Position
6:33384494..33391800
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AA seq
795 aa
AA seq
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MAQQLPCVSAARPLLAAPAVLGPGPWRGRARGRANAAGSARRGAGIGVRTAAAAARPVAS
VAVADEEEEEEEAEAVEERYALGGACRVLAGMPAPLGATALDGGVNFAVYSAGATAASLC
LFTPDDLEADTVTEEVPLDPLLNRTGNVWHVFIEGEQVHEMLYGYRFDGMFAPERGQYYD
ASNVVVDPYAKAVISRGQYGVPGPDGDCWPQMAGMVPLPYSTFDWQGDLPLKYHQKDVVI
YEMHLRGFTKHDSSNTKHPGTYIGAVSKLDYLKELGVNCVELMPCHEFNELEYFSSSSKM
NFWGYSTINFFSPMARYSSRGNSGRDAINEFKVFVREAHKRGIEVIMDVVFNHTAEGNEK
GPILSFRGIDNSTYYMLAPKGEFYNYSGCGNTFNCNHPVVREFILDCLRYWVTEMHVDGF
RFDLASIMTRACSLWDPVNVYGGPMGGDMTTTGTPLVRPPLVDMISNDPILGGVKLIAEA
WDAGGLYQVGQFPHWNIWSEWNGKYRDTVRQFIKGTDGFAGAFAECLCGSPQLYQSGGRK
PWHSVNFVCAHDGFTLADLVTYNNKYNLSNGEDNRDGENHNLSWNCGEEGEFASLSVRRL
RKRQMRNFFVCLMVSQGVPMLYMGDEYGHTKGGNNNTYCHDHYVNYFRWDKKEEQSSDLY
RFCRLMTKFRKECESLGLEDFPTSEQLHWHGHQPGKPDWSEGSRFVAFSMKDETKGEIYV
AFNTSHLPVVVGLPERPGFRWEPVVDTGKAAPYDFLADDLPDRALTINQFSHFLNSNLYP
MLSYSSIVLVLHPDA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagctcccctgcgtctccgccgcgcgcccgctgctcgccgcgcccgcggtg
ctggggccggggccgtggcgcggccgcgcgcgggggcgggccaatgcggcggggagcgcg
aggcggggggcgggaatcggggtccgtaccgccgccgccgcagcgcggcccgtggcttcc
gtggcggtggccgacgaggaggaggaggaggaggaggcggaggcggtggaggagaggtac
gcgctcggcggcgcgtgcagggtgctcgccggaatgcccgcgcctctgggggccaccgcg
ctcgacggcggggtcaacttcgccgtctactccgccggcgccaccgccgcgtcgctgtgc
ctcttcaccccggacgatctcgaggcggatacggtgacagaggaggtcccgcttgatccc
ctgctcaaccggacggggaacgtgtggcacgtgttcatcgaaggggagcaggtgcacgaa
atgctctacgggtacaggtttgatggcatgtttgcccccgagcgtggccagtactatgat
gcgtccaatgtcgtggtggatccgtatgctaaggcagtgataagccgaggtcaatatggt
gtaccagggcctgatggtgattgctggcctcaaatggctggcatggtccctcttccatac
agtacgtttgattggcaaggtgacctacccctgaagtatcatcaaaaggacgttgttatc
tatgaaatgcatttgcgtggattcacaaagcatgattcaagcaacacaaaacacccagga
acttacattggtgctgtgtcaaagcttgactatctaaaggaacttggagtcaattgtgta
gagttaatgccctgtcatgagttcaacgagctggagtacttcagctcctcttccaagatg
aatttctggggatattctacaataaattttttctcaccaatggcaagatattcgtcccgt
ggcaactctggacgcgatgccattaacgaattcaaagtttttgtaagagaggctcacaaa
cggggaattgaggtgatcatggatgttgtcttcaatcatacagctgagggtaatgagaaa
ggcccaatattatcctttagggggatagataatagtacatactacatgcttgcacctaag
ggagagttctataattattccggttgtggaaataccttcaattgtaatcatccagtagtc
cgcgaatttatcctggattgcttgagatactgggtgacagaaatgcatgttgatggtttt
cgctttgacctcgcgtctataatgaccagagcatgcagcttatgggatccagtcaatgtg
tatggtggtccaatggggggtgacatgactacaacagggacacctcttgttagaccacca
cttgttgacatgattagcaatgacccgattcttggaggtgtcaagctcattgctgaagca
tgggatgcaggaggcctctatcaagtaggtcaatttcctcactggaacatttggtcagag
tggaacgggaagtatcgtgataccgtgcgccagttcattaaaggcacagatggatttgct
ggtgcttttgctgaatgtctatgtggaagtccacaattataccagtcaggtgggaggaag
ccttggcacagtgtcaactttgtatgtgcccatgatgggtttacactggctgatttggtg
acatacaataacaagtacaacttgtcaaatggtgaggacaacagagatggggaaaatcat
aatcttagctggaattgtggggaggaaggagaatttgcaagcctatcagtcaggagattg
aggaagaggcaaatgcgcaatttctttgtttgtctaatggtttctcaaggagttccgatg
ctctacatgggcgatgaatatggtcatacaaagggagggaacaacaatacatactgccat
gaccattatgtcaattacttccgttgggataagaaggaagagcaatcctctgacttgtac
agattctgccgcctcatgaccaaattccgcaaggaatgtgaatctcttggccttgaggac
ttcccaacttcagaacagttgcattggcacggtcatcagcctgggaagcctgactggtcg
gaggggagccgattcgttgccttctccatgaaggatgaaaccaaaggtgaaatctacgtg
gccttcaacaccagccacctgccggtggttgtcggacttccagagcgcccggggttccga
tgggagccagtggtggacacaggcaaggctgcaccgtatgacttcctcgccgatgacctg
ccggaccgggcactcaccatcaaccagttctcccatttcctcaactccaacctctaccct
atgctcagctactcttccatcgtcctcgtgttgcatccagatgcttga
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