Setaria viridis (green foxtail): 117861218
Help
Entry
117861218 CDS
T07951
Name
(RefSeq) probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00740
Riboflavin metabolism
svs00790
Folate biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01240
Biosynthesis of cofactors
Module
svs_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
117861218
00790 Folate biosynthesis
117861218
Enzymes [BR:
svs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
117861218
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
117861218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
117861218
NCBI-ProteinID:
XP_034600631
LinkDB
All DBs
Position
6:complement(31639636..31643603)
Genome browser
AA seq
546 aa
AA seq
DB search
MASIAPPSSAWCARIHGQHRTSGLLCDTSILLSATLNNLRTIRSIRLENALRFRNLHVSY
AGGDSSENVIINGKVNPSNAVQADAVALGTIAADMAPVVDGFSADDDELDLDFPTEGFSS
IPEAIEDIRQGKYVIVVDDENRENEGDLIMAASKVTPEAMAFIVRHGTGIVCVSMKEEDL
ERLQLPLMVTTKENEEKLRTAFTVSVDAKEGTTTGVSAKDRANTILALASPNSKPEDFNR
PGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLPPVAVLCEIVDDDDGSMALLPKLQQFA
KRENLKIISIADLIRYRRKRDRLVECVCVTPLQLQWGSFTSYCYRSLIDGMEHIAMVKGD
VGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMTMIEKTGRGVVVYLRGHEGRGIGL
GHKLRAYNLQDDGRDTVEANLELGLPADSREYGIGAQILRDLGVRTMRLMTNNPAKYTGL
KGYGLSVLGRVPLLTPITNENRRYMEAKRLKMGHVYGNRPSSHTSGSGMTDGSAKEEGRQ
EQTPEA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaatcgcgccgccgtcctcggcgtggtgcgcacgcatccatggtcagcacagg
acttctgggttgctttgtgatacttcgattctgctgagtgctacattaaacaatttaagg
acaatcagatccattcgcttggaaaatgccctccgattcagaaaccttcatgtatcttat
gctgggggtgattcatcagagaatgttattataaatgggaaggtcaatccatctaatgca
gttcaagcagatgctgttgcacttgggaccattgcagctgatatggctcctgttgttgat
ggattttctgctgatgatgatgagcttgaccttgacttccctacagagggtttctcatct
atacctgaagctattgaggacattcgtcaaggaaaatacgtcattgttgtcgatgatgaa
aacagagaaaatgaaggtgatcttataatggcagcatcaaaggtcacacctgaggctatg
gcttttatagtgaggcatggcactgggattgtttgtgtcagcatgaaagaagaggatctg
gaaaggctacaacttcctcttatggtgacaacaaaggaaaatgaagagaaactgcggact
gccttcactgtttcagtggatgccaaagagggaacaacaactggggtttcagctaaggac
cgggcaaacacaatactagcgcttgcatctcctaattcaaaacctgaggacttcaaccgt
ccaggacatatttttcctcttaaatatagagaaggtggtgtgctaaaaagggctgggcat
actgaagcatcagtggaccttgccatgttggctgggttacctcctgttgcagttctttgt
gaaattgttgatgatgatgatggctccatggctttgctaccgaaactgcaacaatttgct
aagagggagaacctgaagataatatcaattgcagatctgataagatataggaggaagaga
gacagattggtagaatgtgtttgtgtcacacctttgcagttacaatggggatcatttaca
tcctattgctatagatctcttattgatgggatggaacacattgccatggtgaagggtgat
gttggcgatggccaggatatcttagtaagagtgcattcggagtgcctaactggggacata
tttgggtcggcaagatgcgattgtgggaatcaacttgctctggcaatgaccatgattgag
aaaactggccggggtgtagtagtttatcttcgtggtcatgaaggtaggggcattgggctg
ggtcacaagcttcgggcatacaacttacaggatgatgggcgggatactgttgaggctaac
ttggagctaggtctgcctgctgactcccgggagtatggtataggtgcacagatactgcgc
gatcttggtgtcaggaccatgcggctgatgactaacaaccctgcgaagtacactggactc
aagggttatggtttaagtgtcctgggcagagtaccgttgcttacacccataaccaatgag
aatcggcgctatatggaagcaaagcgactaaagatggggcatgtttatggaaaccgccct
agcagtcatacaagtggcagtggcatgactgatggtagcgcgaaagaggagggcagacaa
gagcaaactccagaagcgtaa
DBGET
integrated database retrieval system
