Setaria viridis (green foxtail): 117861269
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Entry
117861269 CDS
T07951
Name
(RefSeq) serine/arginine-rich splicing factor RSZ23
KO
K12896
serine/arginine-rich splicing factor 7
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117861269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117861269
Spliceosome [BR:
svs03041
]
Common components
Common spliceosomal components
SR proteins
117861269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
Motif
Other DBs
NCBI-GeneID:
117861269
NCBI-ProteinID:
XP_034600692
LinkDB
All DBs
Position
1:complement(30205423..30210259)
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AA seq
237 aa
AA seq
DB search
MARVYVGNLDPRVTAREIEDEFRTFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG
KNGWRVELSTKAGGGRGRDRNGSDMKCYECGETGHFARECRLRIGSGGLGTGRRRSRSPR
YRSRSRSRSRSPRYRRSPSYGRRSYSPRDRSPRRRSDSRSPPPPRARSLSRSPPPARARS
YSKSPPPPPPRNNSRSPPPARDLSRSPPPPPARRSYSRSPGQQPQRDESPYGNGNDA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtctacgtggggaacctggatccgcgcgtcacggcgcgggagatcgaggac
gagttccgcacgttcggggttctgaggagtgtatgggttgctagaaaaccaccaggattt
gccttcattgactttgatgaccgtagggatgcacaagatgccattcgtgaattggatggt
aagaatggatggagggttgagctgtcaaccaaagctggtggtggacgtggccgggaccgt
aatggttctgatatgaagtgctatgagtgtggtgaaactggtcactttgctcgcgaatgt
cgcttacggattggttccggaggcttgggtactggaaggcgccgcagccgaagtcctaga
tatcgcagtcgtagccgcagccgcagccgcagcccaagatatcggaggagcccaagctac
ggcagaaggagctacagcccacgggatcgttctcctaggaggcggagtgacagcaggtct
ccaccgccacctcgtgcacggagtctcagcaggtcacctccaccagctcgagcgcgcagc
tacagcaagtcgccacctccaccacctccgcggaacaacagcagatcgccaccgccagcc
cgtgacctgagcaggtcgccaccaccacctcctgccaggaggagctatagcaggtcccca
ggccagcagccccagcgcgatgagtccccatacggcaatggcaatgatgcgtga
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