KEGG   Setaria viridis (green foxtail): 117861277
Entry
117861277         CDS       T07951                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117861277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:svs03041]
    117861277
Spliceosome [BR:svs03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117861277
 Complex B
    117861277
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 HATPase_c
Other DBs
NCBI-GeneID: 117861277
NCBI-ProteinID: XP_034600698
LinkDB
Position
6:complement(617088..619996)
AA seq 308 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP
GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE
QAAAAYNALQGRFYSGRPIIVEFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGKDL
RRKLHGRSSSMRYHGRSRSPPPQRRGGHRDRDDYHRGRDDYRGGGGGGGGRGRGSRHDRY
DDGGGRGGRHERYDDGGGRGGRHDRYDDGGRRRHGSPPPRRGRSPVRESSEERRAKIEQW
NREREAKQ
NT seq 927 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcgatctttggcactgagaaggacagggtgaactgccctttt
tacttcaagattggggcttgtcgtcatggggatcgctgctcccgtctgcacaacaggcca
accatatctccgactcttgtgcttgctaacatgtatcagcgccctgatatgataacccct
ggagttgatgctcaaggccaacccattgatcctgagaagatgcaggagcattttgaggac
ttctacgaggacatctatgaggagctgggcaagtttggtgagattgagaacctgaatgtc
tgcgacaaccttgctgaccacatgatagggaatgtctatgtccagttcagggaggaagaa
caggcagctgcggcatacaatgctcttcagggccgcttttactctggccgcccgataatt
gtggagttttctcctgtgactgacttccgtgaagcaacctgtaggcagtatgaggagaac
agctgcaaccgtggtggttactgcaatttcatgcatgtgaagcagattgggaaggatctc
aggaggaagctccatgggcgctccagttccatgaggtaccatgggagaagcagaagcccc
ccgcctcaaaggagggggggccatcgtgatcgtgatgactaccatcgtggccgtgatgat
taccgtggtggtggtggtggtggcggcggacggggtagaggcagcaggcatgacaggtat
gatgacggagggggcagaggcggcaggcacgaaaggtacgatgatggagggggcagaggt
ggcaggcacgacaggtacgatgatggaggaaggcgcaggcatggtagcccaccccctagg
cgtgggaggagcccagtcagggagagcagcgaggagcgcagggccaagattgagcagtgg
aaccgtgaacgcgaggcaaagcagtga

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