KEGG   Setaria viridis (green foxtail): 117861283
Entry
117861283         CDS       T07951                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    117861283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svs03400]
    117861283
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      117861283
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core Aha1_N Glyco_hydro_95_C
Other DBs
NCBI-GeneID: 117861283
NCBI-ProteinID: XP_034600702
LinkDB
Position
6:27918596..27924639
AA seq 863 aa
MRRTRSQSASEAKPALPSAGPGTEAATAGAGRRRASPAAKGKSPAKVETGSPLGNTRKKG
RAKAEPKDNASMERCSGGSRGKNNLEEQMEAVRDNDAVDMDWEEGHVEQNEYSHDLGETV
TVEFADDVPSSTSKKTVRRATAEEKELAELVHKVHLLCLIARGRVVDKACNDPLIQASIL
SLVPNHVLWSFTDVTNLRAVNLRNLVSWFHRTFCVTAQSTDRGSFVSNLAFTIQDRVGTA
EEVCALSVALFRALNLTARFVTNLDVAGLKPDTKVMGTLNQDASRLCTRSLPYSSPAADG
NVVSSPALLKDNTQDSVNMNQQRGGPGKSKQTSSCKRSLSKTLSSIKADNESSCISASSQ
LPSTSGNAEVPKRKGDVEFELQLEMALSATAAETQNNNQATHMSQSISSLQDSTPPMKKL
RQNTEATSTSSAVWSRSAGAPLYWAEVYCSGQASTGRWVHADVVNDLLDAERKVEASSAV
CKKPLRYAVAFAGNGAKDVTRRYCLQWHRIAQGRVNPEWWEDVLAPLKQMELTATNNSED
MELQTRALTEPLPTSQQAYKDHHLYALEKWLHKNQILHPKGPVLGFCKGHPVYPRSCVQT
LQSRHGWLREGLQIRENELPAKVVTRPKRAFNAQSVESSANEDALKPNLELYGEWQLEPL
QLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRLPRLFQVAKRLGIDYAPAMVGFDYRS
GRCLPVFDGIVVCTEFKHAILEAYAEEEEKRRAEERKQEEAQALSRWYQLLCSIVTTQRL
KESYKTPSHGLGHEGPPRNDNNIQKNSYSSRRSEREPSSSKLQTDQDHEHVHEYPEEDQS
FDEETFVRTKRCPCGFSIQVEEL
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgcggcggaccaggagccagtccgcgagcgaggcgaaaccggcgctgccctctgccggg
ccgggcacggaggccgcaaccgccggggcgggtcgccggagggcttcgccggcagcgaaa
gggaaatctcccgccaaggtggaaacaggatcaccacttgggaatacacggaaaaagggc
agagccaaggcagaaccaaaggataatgccagcatggagaggtgcagtggagggagccgc
ggaaagaacaatttggaggaacagatggaggctgttcgtgacaatgatgctgttgacatg
gactgggaagaggggcatgtagaacaaaatgagtattcccatgaccttggagagactgtc
actgttgagtttgctgatgatgtaccttcttccactagcaagaagactgttcggagggct
actgctgaagagaaggagttggctgaacttgtgcacaaggtccatttgctctgcctaata
gcaaggggtagggtggttgacaaggcttgcaatgatcctcttattcaggcctcgattctc
tctcttgtaccgaaccatgtattatggagttttactgatgttacaaacctgagagctgtt
aatctacgaaatcttgtgagctggttccatcgtactttttgtgtaaccgcacaatccact
gacaggggatcttttgtatcaaatttggctttcactattcaagatcgtgtaggcactgca
gaagaggtttgtgcactttcagtggcattgttcagggcacttaacttaacagcaaggttt
gttacgaatctggatgttgctggactaaagcctgatactaaagtgatgggaacactcaat
caagatgcatctaggctttgtacaaggtcactaccgtatagttctccagctgctgatggt
aatgtggttagttctcctgctctactgaaagataatactcaagatagtgtcaacatgaat
caacaaagaggaggtcctggaaaatcaaagcagacctcttcctgcaagagaagtttatct
aaaactttgtcaagcataaaagcagataatgaaagtagttgtatatcagccagcagccaa
cttccatccacttctggtaatgctgaagtgccaaaacgaaaaggggatgtggaattcgag
ttgcaactggaaatggctctttcagccacagctgctgaaacccaaaataataatcaagct
acccacatgagtcagtcgattagtagcttacaagattctaccccaccaatgaagaaattg
cgtcaaaatacagaagctacatccacctccagtgcagtttggtcaagaagtgctggagct
ccattatattgggctgaggtatactgcagtgggcaggcgtcaactggaagatgggtgcat
gctgatgttgtgaatgatctccttgatgctgaacgaaaagtagaagcttcttcagctgtt
tgcaagaagcctttaagatatgctgttgcttttgctggaaatggagccaaggatgtaaca
agaaggtattgcttgcaatggcacagaattgcacaggggagagtgaatccggagtggtgg
gaggatgttttggcaccactaaagcagatggaactgacagcaacgaacaattctgaagac
atggaacttcaaaccagagccctaacagaaccgcttcctaccagtcaacaggcctacaaa
gaccatcatctatatgctcttgagaagtggcttcacaagaaccaaattcttcaccccaaa
ggtccagttcttggcttctgcaaagggcatcctgtttatccaagatcctgtgttcaaaca
ctgcaatcaagacatggatggttgcgggagggccttcaaatccgagaaaatgagttgcct
gcaaaggttgttacacgtccaaagagggctttcaatgctcagtcagttgaatcaagtgct
aatgaagatgctcttaagccaaacttggaactatacggtgaatggcaactggaaccgctg
caacttcctcatgctgtagacggcattgtgccaaagaatgaacgaggccaagttgacgta
tggtcagagaagtgccttccacctggtacagtacacttgaggttaccaagattattccag
gttgcaaagagacttggcattgattatgctcctgccatggttggatttgattatcgaagt
ggtcggtgccttccagttttcgatggaattgttgtctgtaccgaatttaagcatgctatc
ctggaggcatatgcagaagaagaggagaagagacgagctgaggagaggaagcaggaggaa
gctcaggcactctccagatggtatcagctgctctgctccattgtaacaacacagagattg
aaggagtcatacaaaacaccttcacacgggcttggtcacgaagggccgcccagaaatgat
aataatatccagaaaaacagttacagcagtcgacgctcagaaagagagcctagttcaagc
aaactgcagacagatcaagaccatgagcatgtgcacgagtatccggaggaagaccagagc
ttcgacgaggagacctttgtgcggacgaaacgctgcccatgtggtttttcaatccaagta
gaggagctgtag

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