Setaria viridis (green foxtail): 117861333
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Entry
117861333 CDS
T07951
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP71
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117861333
03110 Chaperones and folding catalysts [BR:
svs03110
]
117861333
Enzymes [BR:
svs01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117861333
Spliceosome [BR:
svs03041
]
Complex C
Other components
PPlases
117861333
Chaperones and folding catalysts [BR:
svs03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
117861333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
WD40_WDHD1_1st
EIF3I
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
117861333
NCBI-ProteinID:
XP_034600764
LinkDB
All DBs
Position
6:complement(35770202..35775860)
Genome browser
AA seq
648 aa
AA seq
DB search
MASESETTAHSTITTTTLDDGGTHESKRDLGNGAATTPSVGLGEEEEMIGPGPAPAKQRQ
KRPLQFEQAFLDALPSAAMYEKSYMHRDVVTHVAVSPADFFITGSADGHLKFWKKKPAGI
EFAKHFRSHLSPIEGLAVSLDGLLCCTISSDRSVKIYDVVNYDMMFMMRLPFVPGAVEWV
HREGDVKPKLAVSDRNTPFVHIYDTHSGSNDPIISKEIHGCPVKVMKYNHVHNVVISADA
KGLLDYWSPSTLEFPEQEVRFRVKSDTNLFEIAKCKTSVSAIEVSNDGSQFAVTSPDRRI
RVFWFKTGKLRRVYDESLEVAQDLQRSDVPLYHLDAIDFGRRMAVEKEIEKTENVPQPNA
VFDESSNFLIYATLLGIKIVNLHTNKVSRILGKVENNERFLKIALYQGDKGNKKVRKIPS
VAANVNDTKEPLSDPTLLCCAFKKHRIYLFSRREPEEPEDATKGRDVFNEKPPPEELLAV
SDLGKTATTSLPDNLVMHTSMGDIHLRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKG
FMIQTGDPLGDGTGGQSIWGSEFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVAT
PWLDNKHTVFGRVVKGMDVVQQIEKVKTDKNDKPYQDVKILNVTVPKT
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggagagcgagacgacggcgcactccaccataacgacgacgacgctcgacgac
ggtggcacgcacgagagcaagcgggatctcggcaatggcgcggccaccacccccagcgtc
gggctgggggaggaggaggagatgataggcccgggcccggcgcccgcgaagcaacgccag
aagcgcccgctccagttcgagcaggccttcctcgacgccctcccctccgccgccatgtac
gagaagagctatatgcaccgggacgtcgtcacccacgtcgctgtctctcctgctgacttc
tttatcactgggagcgcagatgggcacctcaagttttggaagaagaaacctgctgggatt
gaattcgctaagcattttcggtctcatctcagtcccatcgaaggcttagctgtgagcctt
gatggattgctttgctgcacgatatccagcgatcggtctgtgaagatatacgatgttgta
aactatgacatgatgttcatgatgcgtctcccatttgttcctggggctgttgagtgggtt
catcgagagggggatgtcaaaccaaaacttgccgttagtgaccgaaatacgccttttgtt
cacatatatgatacccattctggttcaaacgacccaatcatctccaaagagattcatggt
tgccctgtcaaagtaatgaaatataaccatgtccataatgttgtgatatctgctgatgcc
aaagggcttttggactactggtctccatctaccctcgagttcccagaacaagaagtgagg
tttcgtgtgaaatcagatacaaatctatttgaaattgcaaaatgcaagacaagtgtttct
gccatcgaggtgagcaacgatggcagtcaatttgctgtcacatcccctgatcgtaggatc
cgggtattttggttcaaaactggaaaactaagacgtgtatatgatgagtccctagaggtg
gcacaagatcttcaaagaagtgatgtcccattgtatcaccttgacgctattgattttggg
cgacgaatggctgtggagaaggaaatagagaaaacagaaaatgttccacaacctaatgct
gtctttgatgagagcagcaactttcttatttatgctacccttttgggcataaagattgta
aatttgcacacaaataaagtttcacgcatcctgggtaaggtagagaacaatgagaggttt
ctgaaaattgctctataccaaggtgacaaaggcaacaagaaggttagaaaaattccttca
gtagcagccaatgtcaatgatactaaggaacccttatcagaccccacgctgttatgctgc
gctttcaaaaagcatcggatatatctctttagtcgtagggaacctgaggagcctgaagat
gcaactaagggtagagatgtgttcaatgaaaaaccaccaccagaagagcttttggctgta
tcagatttaggaaaaactgccacgacatcattgcctgataatttggtgatgcatacttca
atgggtgacattcacttgagactatatccagaagagtgtccaaaaactgtggagaacttc
actacccattgccggaatggatattatgacaatcttatatttcatcgtgtaatcaaagga
ttcatgattcagactggggatcctttgggggacggcactggcgggcaatctatctggggc
agtgaattcgaagatgaatttcacaaaagcttgaggcatgacaggccttttacactttcc
atggccaatgcgggacctaataccaatggttcccaattctttatcaccactgtggccact
ccatggctagataacaagcacacagtgtttggtagagttgtgaaagggatggatgtagtc
cagcaaattgagaaggtgaagactgacaagaatgacaaaccatatcaagatgtaaagatc
ttaaatgttacagttcccaagacataa
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