Setaria viridis (green foxtail): 117861392
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Entry
117861392 CDS
T07951
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00520
Amino sugar and nucleotide sugar metabolism
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117861392
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117861392
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
117861392
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117861392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
MLKL_N
Motif
Other DBs
NCBI-GeneID:
117861392
NCBI-ProteinID:
XP_072150561
LinkDB
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Position
6:32243086..32246763
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AA seq
632 aa
AA seq
DB search
MDKRLNTLAQNTFGVAVKEPAQTVASAIGAHGKEGVVVAVDHGSQLGQDGVIRRNVGRRS
VSDRSRESTVRKHNILWNGQEMKEMESQDEAKRHDDDVAISGKEGVARLGKESGRGSDVE
ARYHNATAMHSNPNASLKKENTSDRSSEKLRGATSEDSDAKAISSSTSHHTSLPDATIRA
IKNQLRTAKTYIGLLPSRGRHAFVRDLRRKMRDIQQALGDATSDRRLPKNVHGLVRAMEL
TLAKIKQVHENCAAVIDKLLATLHSTEDQVQAHKQKANYVAQIAAKALPKRLYCLTLRLT
NEYYSSTTNKKQFPYEERFEDPKLQHYALFSDNVLAAAVVVNSTLINAKNPVSHVFHIVT
DKHNYAAMRMWFLANPIGETAVQVQNIEEFTWLNSSYSPVLKQLESHFMINYYFNTHQDK
PDKNPKFQNPKYLSILNHLRFYLPEIFPKLSKVLFLDDDIVVQQDLSYLWSIDLKGKVNG
AVHTCGETFHRFDRYLNFSNPLIAKKFDRRACGWAYGMNMFDLSEWRKQNITDAYHYWQN
LNANRQLWKLGTLPAGLVTFWNNTFPLDRSWHLLGLGYKPNVNQRDIERAAVVHYNGNRK
PWLEIGLPRYRQFWSKYVNFDHVFLRECNINP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcggctaaacacgctggcacagaacacattcggtgtggcagtgaaagagcct
gcacagacagttgcatctgccataggcgcgcacggcaaggagggcgtggttgtcgcagtg
gatcatggctctcaattgggacaggatggagtaatccggcgaaatgttggtcggagaagt
gtttcagatagatcaagagaatccacggtcagaaagcataacatactgtggaatggacaa
gagatgaaggagatggagtcacaggatgaggctaagaggcatgatgatgatgttgccatt
agtggcaaagagggggttgctcggttgggaaaagaaagtggtcgtggtagtgatgttgaa
gcgaggtaccacaatgctactgcaatgcacagcaatcctaacgcttcattgaaaaaggaa
aatacttctgatagatcatctgagaaattaagaggcgctacctcagaagactctgatgca
aaggcaattagcagtagtactagtcatcatacaagtttgccagatgctacaatacgtgcc
atcaagaaccagttaagaacagcaaaaacatatattgggctcctaccttctagaggccgt
catgcttttgttagagatcttcgaagaaagatgagggatatccaacaagcactcggtgat
gcaacaagtgataggcggttgccaaagaatgtccatggattagttagagctatggagttg
acattagcaaagatcaagcaagtacacgagaactgtgcagctgttattgataagctacta
gcaacccttcattcaactgaggaccaagttcaagctcacaagcaaaaggctaactatgta
gcacaaatagcagctaaggctctaccaaaaaggctctattgtcttacactgcgtcttaca
aatgagtattattcttccaccaccaacaaaaagcagtttccatatgaagaaaggtttgaa
gatccaaagctacagcactatgccttattctcagataatgtactggcagctgcagtggtt
gtgaactcaactcttataaatgctaagaatccagtaagccatgtcttccatattgtgacg
gacaaacacaattatgctgcaatgagaatgtggttcttggcaaatcccattggagaaact
gctgttcaggtccagaacattgaagagtttacatggctaaattcgagctatagtccagtt
ctgaagcagctggagtcccatttcatgatcaactactacttcaatacccatcaggataag
ccggataaaaacccaaagttccagaatcccaagtacctttctattctcaaccatctgaga
ttttatcttcctgagatcttcccgaagcttagcaaggtgctatttctcgatgatgatatt
gtagtccagcaggatttaagttatctttggtcgatagatctcaagggcaaagttaatggc
gctgtccatacctgcggagagactttccataggtttgataggtacctcaacttctcaaat
cctctaatcgctaagaagttcgatcgccgtgcctgtggctgggcatatggcatgaacatg
tttgatttgtctgagtggaggaagcagaatattactgatgcctaccactactggcagaat
ctgaacgcaaacaggcaattatggaaattaggaacacttcccgctggccttgtcacattc
tggaacaacacattccctcttgatcgctcatggcatctcttgggtctagggtacaagccg
aatgtcaaccaaagggatatcgagcgcgcagctgttgtacactacaatgggaatcgaaaa
ccgtggcttgagattggattgccaagataccgccaattctggtccaagtatgtcaatttt
gatcatgtttttctacgtgagtgcaacataaatccatga
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