Setaria viridis (green foxtail): 117861948
Help
Entry
117861948 CDS
T07951
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1
KO
K10523
speckle-type POZ protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117861948
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117861948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
LRR_At5g56370
MATH
BTB_KLHL33
BACK
Motif
Other DBs
NCBI-GeneID:
117861948
NCBI-ProteinID:
XP_034601350
LinkDB
All DBs
Position
6:complement(33659482..33661421)
Genome browser
AA seq
499 aa
AA seq
DB search
MGVIRLLDYAGTKSLAIGDLIHSDEISSGGHIWRILCYPHGDRKADNGVYLSLFLKLVSE
SEKVKAIFDAFLIGRDGAPSPSPSHARRCVKVYGTNKAWGFPQFVERADLESTYIMDGRI
TFMCGAIVLCADPISVPCSDIGDHLGRLLDGADGSDVSFTVGSEKFRAHRAVLAARSPVF
KAQLLGSMAEAKMRCISLHGITPATFQILLRFMYTDALPRDEELEGSSPIELFQHLLAAA
DMYQLDRLKLMCAHKLWERVSAENVATILGCAETHSCPELKSRCLDFFVVEKNFRSAVLT
EGYLRLMQSFPSVIDEIRARFSLFIVSEKFLIDTVLLFLMAPDPTTEMHLCAPNYVFVTS
AQRVVGTLSLFVPSPPEGDGGEEEAAELELPACKGTKSVTLFLAKPWRLRLPPPGSFTAL
TSLTIQYGRMEGGELTALVCTRCPSLRILTLCVTLVAASDFTIRSDSLCSVFLWVKIQEH
TAAGDSRPETAPPVFIRRH
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcatccggctgctcgactacgcaggaaccaagagccttgccatcggcgacctc
atccactccgacgaaatctcctctggggggcacatctggaggatactttgctacccacac
ggagaccggaaggccgacaatggcgtttacctctctctgtttctaaagctcgtcagcgaa
tccgaaaaggtcaaggccatttttgacgcatttctgattggcagagacggcgcgccgtcg
ccgtcgccgtcgcacgcccggcggtgcgtcaaagtgtacggcaccaacaaggcatgggga
tttccacagttcgtggagcgggcagatctagaatccacctacataatggatggccgtatc
acgttcatgtgcggagccatagttctgtgtgccgacccgatatctgtgccatgctctgac
ataggcgaccatcttgggcgcctcctggatggtgccgacggttcggacgtgtccttcacc
gtcggcagcgagaagttccgggctcaccgggcggtgctcgccgcccgctcgccggtgttc
aaggcgcagctcctcggctccatggcggaggccaagatgcgctgcatctcgctgcacggc
atcacgcccgcgacgttccagatcctgctgcggtttatgtacaccgatgcgctgccgaga
gacgaagagctcgagggctcttcccccatcgagttgttccagcatctgctcgcagcagct
gacatgtaccagctggacaggctgaagctcatgtgcgcccacaagctgtgggagcgtgta
tcggcggagaatgtcgcgacaatactaggctgcgctgagacgcacagctgcccggagctg
aagagcaggtgccttgatttcttcgtcgtggagaagaacttcaggagcgcggtgctgacc
gaggggtacctgcggctgatgcagagcttcccatccgtgatcgatgagataagagcacgg
ttctctctctttatcgtctcagaaaagtttctgatcgacactgtattactgttcttgatg
gcccctgatcctacaactgagatgcatctctgtgcacctaactatgtgttcgtcacgtcc
gcgcagcgcgtggtggggacgctctccctgttcgtgccttcgccgccggagggcgacggc
ggggaagaagaggcggcggagctcgagctcccggcgtgcaagggaacgaaaagcgtcacg
ctattcctcgcaaaaccatggaggctccggctgccgccgccgggctcgttcacggcgctg
acctcgctgacgatacaatacggccgcatggaaggcggcgagctcaccgctcttgtctgc
acccgatgcccgagcctgaggatcctgaccctctgcgtcacactggttgctgcctcggat
ttcaccatacgctccgactcgctgtgttcagtcttcttatgggtcaagattcaagaacac
acggcggctggagatagtcgccccgaaactgcaccacctgtctttatccgacgccattga
DBGET
integrated database retrieval system
