Setaria viridis (green foxtail): 117861955
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Entry
117861955 CDS
T07951
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1
KO
K10523
speckle-type POZ protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117861955
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117861955
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Gene cluster
GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
BACK
BACK_BTBD8
Motif
Other DBs
NCBI-GeneID:
117861955
NCBI-ProteinID:
XP_034601357
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Position
6:complement(33726279..33727721)
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AA seq
324 aa
AA seq
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MLDSRFVEFKLDYTKAKDVAIGAVVSSEDISAGGHLWRVNCYPRGSKKEDAGEHLSLYLE
LVSNDSKNVRAIFDAFAIIRDGTPSWSDARRRADVYTERGATKGWHRFVTRRYLDSLYVT
AGGWVTVMCGVIVVLDDDALPPPPDVGAHLGRLLDRADGSDVSFIVGGEAFPAHRAVLAA
RSPVFRAQLLGSMADATMPSIALHDIAPETFRAMLRFIYTDALPAADEEMMRHLLAAADR
YALDRLKIVCARISWDNVSVDTVATTLDCAEMYSCPELKRKCIKFFAAKKNFKKAVLTKG
FVQLGQRFPSVIDELRERVVGLRL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactcccgtttcgtcgagttcaaactcgactacacgaaagccaaggacgtcgcc
atcggggccgttgtgagctccgaggacatctccgccgggggccacctctggagggtcaac
tgctaccctcgtgggagcaagaaagaggacgccggcgagcacctgtccctctacctcgag
ctcgtgagcaacgactccaagaacgtcagggccatcttcgacgccttcgccatcatcaga
gacggcacgccgtcgtggagcgacgccaggaggcgcgccgacgtctacacggaacgcggc
gccaccaaggggtggcaccgcttcgtgacgcggcgctacctcgactccctctacgtgacg
gcgggcggctgggtcaccgtgatgtgcggggtgatcgtcgtgctcgacgacgacgccctg
ccgccgccgcccgacgtcggggcccatctcggccgcctcctggaccgcgccgacggctcg
gacgtctcgttcatcgtcggcggcgaggcgttcccggcgcaccgggccgtgctggctgcc
cgctcgccggtcttcagggcgcagctgctgggctccatggctgatgccaccatgccttcc
atcgccctgcacgacatcgcacccgagacgttcagagctatgctccggttcatctacaca
gacgccttgccggccgcagacgaggagatgatgcgtcatcttcttgctgcagcagaccgg
tatgcattggaccgtctgaagattgtgtgtgccaggatatcgtgggacaatgtgtcggtg
gatacggtcgccactacattggattgcgctgaaatgtacagctgcccggagctgaagcgg
aagtgcatcaagttctttgcggcgaagaaaaatttcaagaaggccgtgttaaccaagggt
ttcgtgcagttgggccagaggttcccgtcagttattgatgagctgcgagaaagggttgtt
gggttacgattatga
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