Setaria viridis (green foxtail): 117862030
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Entry
117862030 CDS
T07951
Name
(RefSeq) ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117862030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117862030
04147 Exosome [BR:
svs04147
]
117862030
04090 CD molecules [BR:
svs04090
]
117862030
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117862030
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117862030
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117862030
CD molecules [BR:
svs04090
]
Proteins
117862030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_21
AAA_25
DUF815
PRK
AAA_28
nSTAND1
Rad17
Motif
Other DBs
NCBI-GeneID:
117862030
NCBI-ProteinID:
XP_034601430
LinkDB
All DBs
Position
6:complement(5065363..5071406)
Genome browser
AA seq
1261 aa
AA seq
DB search
MAMNYYEEHSISSSNADDMDERRSTISVSPEASADEETFSFFRLLCYADTVDWLLMALGT
MGSIIHGIAFPVGYLLLGKALDAFGTNINDQEGMVHALYKVVPYVWYMAAATLPAGMVEI
SCWIYSSERQLARMRLAFLRSVLNQEVGAFDTDLTTATIITGVTNHMSVIQDAIGEKLGH
FVASFSTFFAGIIIAFISCWQVAMLSFLVIPLILVIGATYTKKMIGISLSRNAIISEAIS
VVEQTLSHIKTIFSFVGESWAMKSFVRCMENQFNLSKKEAMIKGIGLGLFQAVTFCSWAL
MVWIGAVAVSKNKATGGGTIAAIMSILFGAISITYAAPDLQTFNQAKAAGKEVFKVIKRK
PSISYDKGGAVLEKIHGEIKFRRVHFAYPSRQDNPILQGFSLTIPAGKVIALVGSSGCGK
STVISLLQRFYDPTSGDIFIDGHSIKKLDLKSLRRNIASVSQEPSLFSGNIKDNLRIGKM
DASDEEIIEAATTANVHSFISKQPNEYLTEVGERGVQLSGGQKQRIAIARAMLKDPPILL
LDEATSALDSESEKLVQDALERAMRGRTVILIAHRMSTIVNADTIVVVENGRVAQTGTHH
ELLEKSTFYSNVCSMQNIEKEAEKKVASTSDNVIEEQIGEAHIRQSSTKQGTKNKLDRVE
SKQPKKEIVREIHPFFRLWYGLHKEDILKILFGSSAAAISGISKPLFGYFIMTIGVAYYD
PDAKRKVSKYSLIFFTAGMVTLVSNILQHYIYGVVGEKAMKNLREALFSAVLRNEIGWFE
KPKNGVGSLTSRIVSDTSTVKTIISDRMAVIVQCISSILIATIVSMYVNWRMGLVSWAVM
PCHFIGGLIQAKSAKGFYGDSAIAHRELVSLASEAASNIRTVASFVYEDEIIKKAELSLR
EPLKKTKIESMKYGVIQGISLCLWNIAHAVALWYTTVLVQRKQASFENSIRSYQIFSLTV
PSITELWTLIPMVMSAIAILNPTFDTLDRETQIVPDKPENPSKGWLVGRTEFQDVHFNYP
SRPEVTILDGFNLIIEPGQKVALVGPSGAGKSSVLALILRFYDPYRGRVLIDNKNIRDYN
LRWLRKQIGLVQQEPILFNISIRDNISYGSEGTSETEIIQAAMEANIHEFISGLPEGYDT
VVGEKGSQLSGGQKQRIAIARTLLKRPALLLLDEATSALDGESERVVISSLGAKEWTNKD
DQSSKITSITVAHRLSTVINADTIVVMEKGKVVELGNHQTLISAADGVYSRLFHLQSNMK
D
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaactactatgaagaacactccatttcatcatctaatgctgatgatatggat
gaaagaagaagcacaatttcagtatcgccagaagctagtgcagatgaggagacattttca
ttctttaggctgctttgctatgccgatacggtagattggctcctcatggccctgggaacc
atggggtctatcatccacggcatagcattcccagttggatatctccttctcgggaaggca
ctcgatgccttcggaaccaatataaatgatcaagaaggcatggtccatgccttgtataag
gtggtcccctatgtgtggtacatggcggcagccactcttcctgctggaatggttgagatc
tcctgctggatatactcaagtgagagacagttagcacggatgcggctagcatttctgaga
tcagtcctcaaccaggaggtaggggcctttgacactgacttgaccactgcaaccatcatc
acgggagtaaccaaccacatgagtgtcatacaagacgcaattggagagaagctgggtcat
ttcgtcgcaagcttctccaccttctttgcgggcatcataattgcatttatcagctgctgg
caagttgcgatgctttccttcctggtcattcctttgatccttgtcattggggctacatac
acgaaaaagatgattggtatatcattgtcacgcaatgctatcatctcagaggcaatatca
gttgtagaacagaccttgtcacatataaagaccatcttctcctttgtcggagagagctgg
gccatgaagtcctttgtacggtgcatggaaaatcagtttaatctaagcaagaaggaagcg
atgataaagggaataggactcggattgttccaagcagtgaccttttgttcatgggcactg
atggtttggattggggcagttgcagtaagcaaaaacaaggcaacaggaggtggcacgata
gctgccatcatgagcatcctctttggtgcaatatcgattacctatgctgcaccagacctt
cagaccttcaatcaggcaaaagctgcaggaaaagaagtcttcaaggtgataaagagaaag
ccatccataagttatgacaaaggtggagctgtactagaaaagatccatggagagatcaaa
ttccgtagggtgcacttcgcgtacccttcccgccaggataatccaattctccaagggttc
tcattgaccatccctgcaggaaaagtcatcgctctggtaggaagcagtggatgtgggaag
agcactgttatttcactacttcaaaggttctatgatccaacttcaggtgacatatttatt
gacggccacagtatcaagaaactagatctgaaatcactgcgcagaaatatagcttcagta
tctcaggaaccatcactattttctggtaacataaaggacaatttgaggattggtaaaatg
gatgcaagtgacgaagagataattgaagcagcaacaacagctaatgttcattcattcata
tccaaacaaccaaatgagtacttgacagaggtaggagaaaggggtgtgcagttatcggga
ggccagaaacaaagaatagcgattgcaagggcaatgctgaaggatccaccaatcctactt
ctcgatgaagcaacaagtgcccttgattcagaatcagaaaagctagttcaagatgcactt
gagagagccatgcgcggaagaactgtcatcttgatagcccacaggatgtccacaattgta
aatgctgacactattgttgttgtggagaatggaagagtggcacaaactgggacacatcac
gagttgcttgagaaaagcacattctactccaatgtatgcagcatgcaaaatatagagaag
gaagctgaaaagaaagtggcaagcacttctgataatgtaatagaggaacaaattggtgag
gcacacatcaggcagtcttctacaaagcagggaacaaagaacaaactagatagagtggag
tcgaagcaaccgaagaaagagattgtaagggaaatacaccctttcttcagactttggtat
ggactgcataaagaggacattctgaagattctatttggctcctcagcagcagccatctct
ggaatctcaaagcccttgtttggttacttcatcatgacaattggtgtggcatattatgat
ccagatgcaaaaagaaaagtcagcaagtattctttgatattcttcacagctgggatggtc
acactggtcagtaacatcttgcagcactatatttatggtgtcgttggagaaaaggcaatg
aaaaacttaagggaggccctcttttcagctgttcttcggaatgagattggttggtttgag
aaaccaaagaatggcgtggggtctctgacctcgcgcattgtcagtgacacctcaacagtc
aagaccatcatatcagacaggatggcagtcattgtacaatgcatctcttcaattctgata
gcaacaatcgtaagcatgtatgttaattggcgaatgggtttagtttcatgggcagtcatg
ccatgccatttcattggtggccttattcaagccaagtcagccaaaggattctatggtgac
tctgctatcgctcaccgggaacttgtctcccttgcttcagaagcggctagcaacatccga
accgtagcatcctttgtttatgaagatgaaataattaagaaagcagaattgtcactgcga
gaacctttgaaaaagaccaagattgagagcatgaagtatggggtgatccaagggatctcg
ctctgcctctggaatattgcacatgcagtggcactttggtacaccacagttttggtccag
aggaagcaagcctcatttgagaacagcataagatcataccagatattctcactcacagta
ccttccatcacagagttatggaccctcattcccatggtcatgtcagcaattgcaatactg
aatcctacatttgacactcttgacagagagacacaaattgtgccagataaaccagaaaac
ccaagcaaaggctggctcgtcgggagaactgagtttcaagatgtgcacttcaactatcca
tcaagaccagaggtgaccattctggatggcttcaatctaattattgaacctggtcaaaaa
gtagctttggttggcccaagtggtgcaggaaaatcctctgtactggctctaatactgaga
ttctatgatccttacagaggcagagttttaatcgacaacaagaatataagggactacaat
ctcagatggctaaggaagcagattgggctagttcaacaagaaccaatcctgtttaacata
tctatcagagataacattagctatggaagtgaaggcacttcagagactgaaataatccaa
gctgcaatggaggcaaacattcatgaattcatcagtggtttgccagaagggtatgacacc
gttgttggagagaaagggagccagctctcaggagggcagaaacagcggattgctattgca
agaactctattaaagaggcctgcccttctgcttcttgatgaggcaactagcgcacttgat
ggtgaatctgagagggtggtaataagctctttaggcgctaaggagtggacaaacaaagat
gatcaatccagtaagattacaagtatcacagttgcacatagattgtccacggtcataaat
gcagacacgatagttgtgatggagaaaggaaaggtggttgaacttggtaatcatcaaacg
ttgatatccgcagctgacggtgtttactcaaggttattccacttgcaaagcaacatgaag
gattaa
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integrated database retrieval system
