Setaria viridis (green foxtail): 117862166
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Entry
117862166 CDS
T07951
Name
(RefSeq) serrate RNA effector molecule-like
KO
K27103
serrate RNA effector molecule
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117862166
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
117862166
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
117862166
NCBI-ProteinID:
XP_034601580
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Position
6:33412657..33418867
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AA seq
643 aa
AA seq
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MAEVADASPPPTGGGGGGGGDRKRRHASPVLPPPPPGPPPPGPHKRHRREEGGGGFDRRR
LGPVGGGGHEQDDRRYGNGHGGVGGRGGDGRYGNRAPDWSDSGRGGWNEGPGNGRREGLM
SYKQFIQELEDDVSPVEAQSRYEEYKSEYITTQKKAYFDLHKDEDWLRNKYNPTNLEGVI
ERRNELARTTANEFFQDLQSGSLDTGPGLTGSAASKSGNNSSKNLVDADGKKGKLGKGTD
DLYYAAPKAHPVSSEARRIRSDIEQAQALICKLDSEKGIENNVLSSSDHDKTDRDKSHGS
MGPIVIIRGSSTVKGLEGAELLDTLVTYLWRIHGVDYYGMSETNEPKGLRHVKADARTYN
GDSSNATEWENKLDSFWQDRIQGQDPLEILKAKEKIDAAATEVLDPYVRKIRDEKYGWKY
GCGAKGCTKLFHAAEFVQKHLKLKHADVVVELTSKVREDIYFENYMNDPKAPGGTPIMQQ
PAPRGKGRQRPPIESRLRDERGNRRFDTNVDSPPHDGSGENPDDAIYDSFGDPIMHGAFP
PDIPAPPILMPVPGAGPLGPFIPAPPEVAMHMMRDQGGPPHFEPAGGPHPRKAGRGGGPP
MRGPSPIFSAPPPTHMHDPRRIRSYQDLDAPEDEVTVMDYRSL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggtcgcggacgcgtcccctccccccaccggcggcggcggcggcggcggcggg
gaccgcaagcgccgccacgcctcgcctgtgctcccgccgccgccccccgggcccccgccg
ccggggccgcacaagaggcatcgcagggaggagggcggcggcgggttcgaccggcgccgg
ctcggtccagttggcggcggagggcacgagcaggacgacaggaggtatggcaacggtcat
ggtggcgtaggaggaagaggtggtgatggtcgatatgggaatcgtgcaccagattggtcg
gattctggacgtggtggatggaatgaaggccctgggaatggccgtagggaaggactgatg
tcatacaagcagttcattcaggagctcgaggatgatgtttcaccagttgaagctcaaagc
agatacgaggagtacaagtcagagtacatcacaactcagaagaaagcatactttgacctc
cataaggatgaagattggttaagaaacaagtacaatcctacaaatcttgaaggggtcata
gaaagaaggaatgaactggcaagaactactgcaaatgaattcttccaagatttacagagt
ggaagtctggacactggtccagggttgacaggttcagcagcgagcaaatcaggaaataat
agtagtaaaaatcttgtggatgcagatggtaaaaaagggaaacttgggaagggcactgac
gatttatactatgctgctcccaaggctcacccagttagttctgaggctcggcgaatccga
agtgacattgagcaagctcaagctctcatctgtaaacttgattctgagaagggtattgag
aacaatgttctctccagtagtgaccatgacaagacagacagggataagtcacatggttca
atggggccaattgttataatacggggatcatctactgtgaagggtcttgagggtgctgag
ttgctggacactcttgttacttacttatggcgcatccatggtgtagattattatggtatg
tctgagacaaatgaacctaaaggcctgagacatgtgaaagctgatgcgaggacatataat
ggggatagctcaaatgcaactgaatgggagaataaacttgattcattctggcaagacagg
attcaaggtcaagacccgttagaaatattgaaagcaaaggagaagattgatgcagctgct
actgaagtgttggatccatatgtgaggaaaataagggatgaaaagtatgggtggaagtat
ggttgtggagccaagggttgcactaagcttttccatgctgccgagtttgtccagaagcat
cttaaactcaagcatgcagatgtggtggttgagctaacttcgaaagtgagagaggatatt
tactttgagaactatatgaatgatccaaaggcgcctggtggaacacctatcatgcagcaa
cctgctccaaggggaaaaggcaggcaaaggccaccaatagaaagtcggctgagggatgag
cgtggaaatcgtaggttcgacacaaatgttgattcaccaccacatgatgggtctggtgaa
aaccctgatgatgctatttatgattcatttggtgatccaattatgcatggcgccttccct
ccagatattcctgctcccccgattctaatgcccgtgcctggtgctggtccgctgggacca
tttattcctgcacccccggaagttgccatgcatatgatgagggatcagggtgggccacct
cattttgagccagctggaggtccacatcctaggaaagcagggaggggtggtggcccccca
atgcgtggtccatccccaatcttcagcgctcctccgcctacccatatgcatgatcctcgt
agaatacgaagctaccaagaccttgatgctcctgaagacgaagtgactgtgatggactac
cgaagcttgtag
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