Setaria viridis (green foxtail): 117862260
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Entry
117862260 CDS
T07951
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117862260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117862260
04147 Exosome [BR:
svs04147
]
117862260
04090 CD molecules [BR:
svs04090
]
117862260
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117862260
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117862260
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117862260
CD molecules [BR:
svs04090
]
Proteins
117862260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
RsgA_GTPase
AAA_25
Zeta_toxin
nSTAND1
DUF6264
AAA_5
DUF815
DUF87
Rad17
Motif
Other DBs
NCBI-GeneID:
117862260
NCBI-ProteinID:
XP_034601684
LinkDB
All DBs
Position
6:36316766..36322780
Genome browser
AA seq
1355 aa
AA seq
DB search
MSSSSAAADPDEIRARVVVLGAPHADAADEWARPELEAFHLPSPAAAAFLEAPPQQHPET
ESAPAPPPAPAPEQSPAPPPPPNAAARASSSGNDDAKKATPPAALRDLFRFADGLDCVLM
LVGTLGALVHGCSLPVFLRFFADLVDSFGSHADDPDTMVRLVVKYAFYFLVVGAAIWASS
WAEISCWMWTGERQTTRMRIRYLDAALRQDVSFFDTDVRASDVIYAINADAVLVQDAISE
KLGNLIHYMATFVAGFVVGFTAAWQLALVTLAVVPLIAVIGGLSAAALSKLSARSQDALS
GASAIAEQALAQIRIVQAFVGEDRAMRAYSAALAVAQKIGYRSGVAKGLGLGGTYFTVFC
CYGLLLWYGGHLVRAHRTNGGLAIATMFSVMIGGIALGQSAPSMAAFAKARVAAAKIFRI
IDHKPGISRDGQVELDSVTGRVEMRGVDFAYPTRPDVPILRAFSLTVPAGKTIALVGSSG
SGKSTVVSLIERFYDPSAGQILLDGHDLKSLKLRWLRQQMGLVSQEPTLFATSIKENLLL
GRESETATQAEMEEAARVANAHSFIIKLPQGYDTQVGDRGLQLSGGQKQRIAIARAMLKN
PAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQGGAVSE
MGTHDELMAKGEQGTYAKLIRMQEQAHEAALVNARRSSARPSSARNSVSSPIMTRNSSYG
RSPYSRRLSDFSTADFTLSIAHHHDSSSKQMAFRAGASSFLRLARMNSPEWGYALLGSLG
SMVCGSFSAIFAYVLSAVLSVYYAADPRYMERQIAKYCYLLIGMSSAALVFNTVQHVFWD
AVGENLTKRVREKMFAAVLRNEMAWFDADENASARVAARLALDAQNVRSAIGDRISVIVQ
NSALLLVACTAGFVLQWRLALVLLAVFPLVVGATVLQKMFMKGFSGDLEAAHARATQIAG
EAVANLRTVAAFNAERKITGLFESNLRGPLRRCVWKGQIAGIGYGVAQFLLYASYALGLW
YAAWLVKHGVSDFSRTIRVFMVLMVSANGAAETLTLAPDFVKGGRAMRSLFETIDRKTEV
EPDDVDAAPVPDRPRGEVELRHVDFAYPTRPDVQVLRDLSLRARAGKTLALVGPSGCGKS
SVLALVLRFYEPSSGRVLLDGKDVRKYNLRALRRVVAVVPQEPFLFAASIHDNIAYGREE
GATEAEVVEAAAQANAHKFISALPEGYRTQVGERGVQLSGGQRQRIAIARALLKKAPIML
LDEATSALDAESERCVQEALDRAGAGRTTIVVAHRLATVRGAHSIAVIDDGKVVEQGSHS
HLLKHHPDGCYARMLQLQRLTTGAAPGAGPSSSAS
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagcagcgccgccgccgacccggacgagatcagggcgcgcgtcgtcgtcctc
ggcgccccccatgccgacgccgccgacgagtgggcgcgcccggagctcgaggccttccac
ctcccgtcccccgccgcggccgccttcctagaagcaccaccgcaacaacacccggagaca
gaatccgcccctgctccacctccagctccagctccagagcaatcccctgctccacctcca
cctcccaatgccgccgccagggcgtccagcagtggcaatgacgacgcaaagaaggccacc
ccgcccgccgccctgcgcgacctcttccgcttcgccgacggcctcgactgcgtcctcatg
ctcgtcggcaccctcggcgccctcgtccacggctgctcgctccccgtcttcctccgcttc
ttcgccgacctcgtcgactccttcggctcccacgccgacgacccggacaccatggtccgc
ctcgtcgtcaagtacgcattctacttcctcgtcgtgggggcagccatctgggcatcctcc
tgggccgagatctcctgctggatgtggaccggcgagcgccagaccacccggatgcgcatc
cgctacctcgacgccgccctccgccaggacgtctccttcttcgacaccgacgtccgcgcc
tccgacgtcatctacgccatcaacgccgacgccgtcctcgtccaggacgccatcagcgag
aagctcggaaacctcatccactacatggccaccttcgtcgccggattcgtcgtcggattc
accgcagcgtggcagctcgcgctcgtcacgctcgccgtcgtcccgctcatcgccgtcatc
gggggcctcagcgccgccgcgctctccaagctctccgcaaggagccaggacgcgctctcc
ggcgccagcgccatcgccgagcaggcgctggcgcagatacggatcgtgcaggccttcgtc
ggcgaggaccgcgccatgcgggcatactcggcggcgctggccgtcgcgcagaagatcgga
taccggagcggcgtcgccaaggggctcggcctcggaggcacctacttcaccgtcttctgc
tgctacgggctgctgctctggtacgggggccacctggtgcgcgcccaccgcaccaacgga
gggctcgccatcgccaccatgttctccgtcatgatcgggggcatcgccctggggcagtcg
gcgcccagcatggccgccttcgccaaggcgcgcgtcgcggcggccaagatcttccgcatc
atcgaccacaagccggggatctcgcgggacggccaggttgagctggactccgtcacgggg
cgggtggagatgcggggcgtcgacttcgcgtacccgacacggccggacgtgcccatcctg
cgcgccttctcgctcaccgtgcccgccggaaagaccatcgcgctggtcggcagctccggc
tccgggaagagcaccgtcgtctcgctcatcgagaggttctacgaccccagcgcagggcag
atcctgctcgacgggcatgatctcaagagcctgaagctccggtggctccgccagcagatg
ggcctggtgagtcaggagccgacgctgttcgcgacgagcatcaaggagaacctgctgctg
gggcgggagagcgagaccgccacgcaggcagagatggaggaggccgccagggtggccaac
gcccactccttcatcatcaagctcccacaaggctacgacacgcaggtcggcgatcgcggt
ctccagctctccggcggccagaagcagcgcatcgccatcgcccgcgccatgctcaagaac
ccggcgatccttctgctggacgaggcgacgagcgcgctggactcggagtcggagaagctg
gtgcaggaggcactggaccggttcatgatcgggcgcaccaccctggtgatcgcccaccgc
ctctccaccatccgcaaggccgacctggtggcggtgctgcagggcggcgccgtgtcggag
atgggcacgcacgacgagctcatggccaagggggagcaaggcacctacgccaagctgatc
cgcatgcaggagcaggcgcacgaggcggcgctggtgaacgcccgccggagcagcgccagg
ccgtcgagcgcccgcaactcggtgagctccccgatcatgacgcgcaactcctcctacggc
cgctccccctactcgcgccgcctctccgacttctccaccgccgacttcaccctctccatc
gcccaccaccacgactcgtcgtccaagcagatggccttccgcgccggggccagctccttc
ctccggctggccaggatgaactcgcccgagtggggctacgcgctcctgggatccctgggc
tccatggtgtgcggctccttcagcgccatcttcgcctacgtgctcagcgccgtgctcagc
gtgtactacgccgccgacccgcgctacatggagcgccagatcgccaagtactgctacctg
ctcatcggcatgtcgtcggcggcgctggtgttcaacacggtgcagcacgtgttctgggac
gccgtcggcgagaacctgaccaagcgcgtgcgcgagaagatgttcgccgccgtgctccgc
aacgagatggcctggttcgacgccgacgagaacgcgagcgcgcgcgtcgccgcccggctg
gcgctggacgcccagaacgtgcggtccgccatcggggaccgcatctcggtaatcgtgcag
aactcggcgctgctgctggtggcgtgcacggcggggttcgtcctgcagtggcgcctcgcg
ctggtgctcctcgccgtgttcccgctcgtggtgggcgccaccgtgctgcagaagatgttc
atgaagggcttctcgggggacctggaggcggcgcacgcccgggccacgcagatcgccggc
gaagccgtggcgaacctgcgcacggtggcggccttcaacgcggagcgcaagatcacgggg
ctcttcgagtccaacctgcggggcccgctgcggcggtgcgtgtggaaggggcagatcgcc
ggcatcggctacggcgtggcgcagttcctgctgtacgcgtcgtacgcgctggggctgtgg
tacgcggcgtggctggttaagcacggcgtgtccgacttctcgcgcaccatccgcgtgttc
atggtgctcatggtctccgccaacggcgccgccgagacactgacgctggcgccggacttc
gtcaagggcgggcgcgccatgcgctccttgttcgagaccatcgaccgcaagacggaggtg
gagcccgacgacgtggacgcggcgcccgtgcccgaccggccccgcggagaggtggagctc
aggcacgtggacttcgcgtacccgacgcggccggacgtgcaggtgctccgggacctcagc
ctccgggcgcgcgcggggaagacgctggcgctggtggggccgagcgggtgcggcaagagc
tccgtgctggcgctggtgctgcgcttctacgagccgagctccgggagggtgctcctggac
ggcaaggacgtgcgcaagtacaacctacgggcgctgcggcgggtggtggcggtggtgccg
caggagcccttcctgttcgcggcgagcatccacgacaacatcgcgtacgggcgcgaggag
ggcgcgacggaggcggaggtggtggaggcggcggcgcaggcgaacgcgcacaagttcatc
tcggcgctgccggaggggtaccggacgcaggtgggggagcgcggggtgcagctctccggc
gggcagcggcagcggatcgccatcgcgcgcgcgctcctgaagaaggcgcccatcatgctg
ctggacgaggccaccagcgcgctcgacgccgagtccgagcggtgcgtgcaggaggcgctc
gaccgcgccggggcggggcgcaccaccatcgtcgtcgcgcaccggctggccaccgtgcgc
ggcgcacacagcatcgccgtcatcgacgacggcaaggtggtggagcagggatcgcactcc
cacctgctcaagcaccaccccgacggatgctacgcgcgcatgctgcagctgcagaggctc
acgaccggtgctgcacctggagctggaccctcctcgtcggcttcctag
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integrated database retrieval system
