Setaria viridis (green foxtail): 117862273
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Entry
117862273 CDS
T07951
Name
(RefSeq) preprotein translocase subunit SECY, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03060
Protein export
svs04141
Protein processing in endoplasmic reticulum
svs04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
117862273
04141 Protein processing in endoplasmic reticulum
117862273
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117862273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117862273
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
svs02044
]
117862273
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
117862273
Secretion system [BR:
svs02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
117862273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
117862273
NCBI-ProteinID:
XP_034601698
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Position
6:complement(10361053..10374437)
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AA seq
552 aa
AA seq
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MATATATPPQCWRGLPAPARTPPPLCSPLWRRPLAAPFHPPRCRTAITTVRRRRAALACS
PRCTLETAGPAGFDPLGLYKERTSGSASSSRSPLSTFFGILAPVFGSSNGGGARRENRGA
AAAIEDSSIDIDDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLG
TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTR
YASVGFAIVQAIGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGT
SLLIFTSIISYLPASFGRTVSQAFQDGNYVGLLTIILSFFLLVLGIVYVQEAERKIPLNY
ASRYSSRTGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAVALIP
GGSLYLPTNVLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAYIKTVLSR
ISVLGSAFLAVLAAGPSVVEQISHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK
NIEFYDVNRFDQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggccactgccacggcgaccccgccgcaatgctggcgagggctcccggcccccgcgcgg
acacctccacctctctgctctcccctctggcggcgccccctcgccgctcccttccatccc
ccgaggtgccgcaccgccattactacagtcagacgacggcgagccgccctggcttgctcc
cctaggtgcacgctggagacggctggccctgctggcttcgaccctctggggctgtacaag
gagaggacatcggggtctgcttcctcttcgcggtcgcccctgtcgaccttctttggtatc
ctggcgccggtttttgggagctcaaacggtggtggggccaggagggagaaccgaggagcc
gcagctgctattgaggatagctccattgacattgatgacttcttcaagggccctctacct
gggaagttcctgaagctccttggttttttggccttatctcggcttggtgtgtatataccc
ttgggtggggtgaacagagaagcttttgctgggaatcttgaccagaacagcctgctgggc
actttagattctttctccggtggtggtatcggtcgtcttggaatatgctcccttggcatt
gtgccatttattaatgcacagattgtgtttcaactgcttgcacaactttacccaaaattg
caagaccttcagcggaaagaaggggaagcaggaagaaagaaggttcttcaatatacaaga
tatgcctctgttggttttgcaattgtccaggctattggacaagttctttatctccgtcct
tatgtgaatgacttcagcacagaatgggttctaacatcggtgacattattgacacttgga
tcagtctttactacattcattggtgaaagaatatctgatttgaaacttggaaatggaaca
tctcttcttatatttacaagtataatatcatatttgccggcatcatttgggaggacagtg
tcacaagcatttcaagatgggaactatgttggacttctcacaatcatattgtcattcttt
ttattagtgcttgggattgtctatgttcaagaagctgaacgcaaaatacccctcaactat
gcttctcgatacagcagtcgaactggggggcttcaacgatctgcatatctaccatttaag
gtcaacagttctggtgtcatgcctatcattttttctacatcttccctggctttgcctggt
actttggcacggttcactggcttggagtttcttaagaaggctgctgtagcccttattcca
ggaggttctctgtatcttccaactaatgtattacttatagccttctttaattactattac
acatttctccaattggaccccgatgatcttagtgagcaattgaagcggcaaggtgcttct
atacctcttgtgagaccaggaaaaagtacagctgcttatattaaaacagttctcagtcgt
atatctgtcctgggatctgcatttcttgctgtgctagctgctggaccttctgtggttgaa
caaataagtcacttgacggcattccggggatttgctggtacatcagtgcttatccttgtt
gggtgtgcaactgacacagctcggaaagttcaagcagaaataatttcccagaaatataag
aatatcgagttctatgatgtcaaccgttttgaccaatag
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