Setaria viridis (green foxtail): 117862374
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Entry
117862374 CDS
T07951
Name
(RefSeq) ATP-dependent DNA helicase MER3 homolog
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117862374
Enzymes [BR:
svs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117862374
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117862374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
AAA_22
HHH
Motif
Other DBs
NCBI-GeneID:
117862374
NCBI-ProteinID:
XP_034601723
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All DBs
Position
1:31008376..31017616
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AA seq
1223 aa
AA seq
DB search
MGSLVDPYALRCVSDLPPPFRPVFGFRYFNSLQSECFHVCFFSDVNMVISAPTGSGKTVL
FELCILRLLSRFLSPDLRFNLVKGTLKTIYIAPSKALVQEKLRDWNTKLGPLGINCLEMT
GDNEFYNNKAIHDADLILTTPEKFDSMSRHGVRDGRLGFFSDIALVLIDEVHLLNDPRGA
ALEAVISRIKMLSRQGNMKSSPLANVRFIAVSATIPNIEDIAEWLLAPPEGVKRFGEEMR
PVKLTTKVFGYAPAKNDFLFERRLQSFIYDILMQHSRGKSALVFCSTRKGAQEAAQCLSQ
TGASLGYSNPFMQSMQQYEHLREASLTCSDKQLQACIVHGVGFHNGGLCLKDRNLVEGLF
LKGDLQILCTTNTLAHGVNLPAHTVVIKSTQFFNKEKGLYVEYERSMVLQMCGRAGRPPF
DDTGTIIIMTRRETVHLYENLLNGCEMVESQLLPCAVEHLNAEIVQLTVADISLAIEWIK
CSYLYIRIKKNPENYGVKRGTPRDLLEKQIQGICVEKIHELVEYGLILTDEYAFLLQPLE
PGKLMAKFYLKFDTMKLIVKASACCSLEDLLHIICHSAEITWIQLRRNEKKVLNDINTDK
DGRLLFHIVMENGKRKKRVQTREDKIFLLANDCLTGDPLIHDLSLNQEMNSICSNGCRIA
RCMREYFIYKKSYRSAINSMILANSLHQKLWERSPFLLKQLPGIGIVTAKALKSAGICDF
DTLAAADARKIESVTGRNYPFGNHIKELMSSLPPKIDIHIEDAGNRLGKSTITVTLTRLS
QAIQSNKRNFADMVVGSEEDNVILFHEKIRTQEFHSPYSVKVFVPCPPNARVTLKADLIF
EEYVGLDVHKKHIISREDDLHVTKAHGIDKAEPTYNLPAEICLVSSRTIRTSRSQSRTEQ
SPLSKEVYVIEDDAVTALEKADNVQGTRKFNNLASLEVPSFDLLSEEEYGDMQAAASTPE
PAEAECKSATSNTIFDHIRKKSKDFPTLVLSKSMDSSYEPLILKKMKTSRDQFGVEQSSL
HTGGVTPMDSEPAEPRVSPTNMLFTGKRNSPSEKKIMTTPGESPLRFSGENDSPLEKSKI
LINAPAENSHLQLAAKRSSPSEKSKMTTTLDECSLGLAGGKDRPLEKSNILIRTPVENPF
EKGTPAENSPQFAAKRDSPSEKRKFSFSSSLPCFQAEQCTKQEVRAAYQPFNIEEYVKDI
LRKPKDSENGDSFLNCRSVFSFL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgggatctctcgtcgacccgtacgcgctacgctgtgtctccgatctgcccccgccattc
cgccccgtgtttgggttcagatacttcaattccttgcagagcgagtgcttccatgtgtgc
ttcttctcagatgtgaacatggttatctctgcacctactgggagtgggaagaccgtgctg
tttgagctctgcatcctgaggctcctctctaggttcctttcaccagacctgaggttcaat
ttggttaaaggaactctgaaaacaatctacattgcaccctccaaggcgctagtgcaggag
aagctgcgggactggaacacgaagctgggcccattggggatcaattgcttggagatgact
ggtgacaatgaattctacaacaataaagccatacacgatgctgatttgatcctcaccact
cctgagaagtttgattctatgagccgacatggtgtaagagatggtagattgggtttcttc
agtgacattgctcttgtccttattgatgaagttcaccttctcaatgatccacgtggagct
gcattggaagcagttatcagtagaattaaaatgctttcgcgacagggcaacatgaaatct
tctcctttggctaatgttcgattcatagctgtttctgccactatccctaatattgaggac
atagcggagtggctcctagcacccccagaaggagttaaaagatttggagaagaaatgagg
ccagtgaagttgacaaccaaggtctttggttatgctccagctaaaaacgacttccttttt
gagaggaggttgcaaagttttatttacgatatcctgatgcaacattcaagagggaagtct
gcacttgttttctgttctacaagaaaaggtgcacaggaagcagcgcagtgcctttcacaa
actggagcatcgcttgggtattcgaatccatttatgcaatcaatgcagcagtatgaacat
ctaagggaggcttctctaacctgtagtgacaagcaactgcaggcttgcattgtacatgga
gttggttttcataatggtggtctttgcttaaaagatcggaatcttgttgagggtcttttt
ctcaagggtgatcttcaaattctatgcacaacaaatactttggcgcatggtgtcaactta
ccagcacatacagttgtcataaagtcaacacaatttttcaacaaagagaaaggcctatat
gtagaatatgagaggtccatggtgcttcagatgtgtgggagggctggacgcccaccattt
gatgatactggaacaattataattatgacaagaagagaaacagttcatctatatgagaac
cttctaaatggatgtgaaatggtggagtctcagttgctgccatgtgcagtggagcatcta
aatgcagaaattgttcagctgacagtagctgacataagtttggcaattgagtggatcaag
tgctcatatttgtacatcaggataaagaagaatcctgagaactacggagttaagaggggg
actcctagagatctccttgaaaagcaaattcaaggtatatgtgttgagaagattcatgag
ttggtagagtatggactgattttgacagatgaatacgctttccttctacaaccattagaa
cctgggaagctgatggcaaaattctacctgaagtttgatacaatgaagcttatcgtcaaa
gcttctgcctgttgcagtttggaagatttattgcatatcatctgtcactctgcagagatt
acttggatccaactacgccgaaatgagaagaaggttctaaatgacataaacactgacaaa
gatggtagactcctcttccatattgtcatggagaatggaaaaaggaagaagcgtgttcag
acaagagaagacaaaatattcttgctagcaaatgactgcttaactggggatcccctgatc
catgatttatccctcaaccaggagatgaattcaatatgctcaaatggatgtaggattgcc
aggtgcatgagagaatactttatatacaaaaagagttacagatctgctataaattctatg
atccttgcaaatagtctacatcaaaagctttgggagaggagtccatttcttctgaaacaa
ctgcctgggattggaattgtaacagcaaaggctctgaagagtgctggaatttgtgacttt
gacaccttggcagctgctgatgctagaaagatagaatcagtaacagggcgcaattatcca
tttggcaatcatataaaggaattaatgtcatcattaccacccaaaattgacatacacata
gaggatgctggaaacagactggggaaatcgaccattactgtaacactgactcgtctatca
caggcaattcaatccaataaacgcaattttgctgacatggttgtgggctcggaggaagac
aatgtgatcctctttcatgagaaaataaggactcaagaattccacagcccatattctgta
aaagtttttgtgccatgccccccgaatgcacgggtcactctgaaggctgatctaatattt
gaagaatatgttggtcttgatgtgcacaagaagcatataatcagcagagaagatgatttg
catgtcaccaaagcgcatgggatagataaggctgaacccacatacaatcttcctgcagag
atttgtttggttagctccagaacaattcgaacaagccgatctcagtctcgcactgaacag
agccctctttccaaagaggtatatgtcatagaagatgatgctgtcactgctctcgagaaa
gctgataatgtacaaggaaccagaaaatttaacaacttggcttcactggaggtccccagc
tttgatctgctgtctgaggaagagtacggagatatgcaagctgctgcatcaactcctgaa
ccagcagaggcagaatgcaaaagtgccacaagcaacacgatctttgatcacatacgcaag
aaatccaaagatttccccactctggtgctgtcaaaatccatggatagctcttatgaacct
ctgatactgaagaagatgaaaacatcaagagaccagtttggggtagaacagagcagtctg
cacacgggcggggtcacgccaatggattctgaacctgctgagcctagggtctctccaacc
aatatgctgtttactggcaaaaggaacagcccatctgagaagaagataatgacaacgcca
ggcgaaagccctcttcggttttctggtgaaaatgacagcccattggagaagagcaagatc
ctgatcaacgctccagctgaaaactctcatctccaacttgcagccaaacgtagcagccca
tctgagaagagcaagatgacgacaactctagatgaatgctctcttgggcttgcaggtgga
aaggaccgcccgctggagaagagcaacatcttgatcagaactccagttgaaaatcctttc
gaaaaaggaactccagccgaaaactctcctcagtttgcagctaaacgtgacagcccatct
gagaagaggaaattcagcttcagcagttcccttccatgcttccaggctgagcaatgcaca
aagcaagaagtccgagctgcatatcaacccttcaatattgaggaatatgtcaaggatata
ttgcggaaaccaaaggatagcgagaacggcgactcttttcttaattgtaggagcgtcttt
tcctttctctga
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