Setaria viridis (green foxtail): 117862378
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Entry
117862378 CDS
T07951
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117862378
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117862378
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117862378
Membrane trafficking [BR:
svs04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
117862378
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vps54
Syndetin_C
Vps54_N
DUF7791
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
117862378
NCBI-ProteinID:
XP_034601727
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Position
7:11809638..11825021
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AA seq
1002 aa
AA seq
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MASRPPLRTTSVASVSSSTDSPTFAGPPGGVPQSITALLNNPLPSAAASSYSWLPWPPPT
IALPEAAPTPPSHPCEVTRADFAPYLAAVSDPYARFADIRLHATAELAASSDAEGAPAAS
SGLAACLREVPALFFKEDFALEDGPTFQAACPLDDDGLQERLGQHLDVVEAHLVREIALR
SESFYEAQGRLRGLDGEIVTAVGRIRELREVVRVLTGDLVGSARQVQELNATRGNLVALQ
QKLTVILYVSQALAALKLLVAAADCAGALDVIDDLQNLLDTDELAGLYCFRHIRDQLGTS
LDSVNSILSAEFVHAAVPDGKAVDAMISSNVKRKASSPLNGTEHEGNIDEEESFILRDRL
LPLIICLLRTDKLPAVLRIYRDTLITVMKASIKATVAELLPVLTARPIDSDSVTGDRAAD
ADAGGQSLANKLRSLSSEGFVQLLSAIFRIVQVHLQQAAEVKRIVEWIMGNLDGTLSIDA
SNPTVQHGGSVVSDISQENDYSVSSRVSNTLTRSTSKIPFVQAKANDLSIINSIKNVRAD
VLRENTEAVFAACDAAHGRWAKLLGVRAALHPRLRLQEFLIIYNITEEFIAATEKVGGRL
GYNIRGILQQQSKQFVDYQHSVRMTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVN
GMDMPGAEDNSKFSDPTSQEPTYSGENNADNGKLTSAIGESKVESTSPQTENNATGNQRS
TLQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNNRTCQL
VLGAGAMQVSGLKSITSKHLALASQIISFIHSLIPDIRRVLFLKIPEARKQLLMSELDRV
TQDYKVHRDEIHSKLVQIMRERLLANLRKLPQIVEGWNGPEDNDLQPSQFAKAVTKEVNY
LHRILSQTLLEVDVQTIFRQVVQIFHSHITEAFRKLEVSTPQAKNRLCRDVQHILTCIRK
LPAENFSAETTPNYGLLDEFLAENFGTKVGIAVQDSEGRAPR
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcccgcccctccgcaccacctccgtcgcctccgtctcctcctccaccgac
tcccccaccttcgccgggcctcccggcggcgtcccgcagtccatcaccgcgctcctcaac
aacccgcttccctccgccgccgcctcatcctactcctggctaccctggccgcccccaacc
atcgctctccccgaggcggctcccacgccaccgtcgcacccctgcgaggtcacccgcgcc
gacttcgcgccctacctcgccgccgtctccgacccctatgctcgcttcgctgacattcgc
ctccacgccaccgccgagctcgccgcctcctcggacgctgagggtgcccctgctgcctcc
tccggccttgccgcctgcctccgcgaggtgcccgcgctcttcttcaaggaggacttcgcg
ctcgaggacggacccacgttccaggccgcctgcccgctcgacgacgacgggctgcaggag
cgcctcggccagcacctcgatgtcgtcgaggcgcacctcgtgcgggagatcgcgctccgg
tccgagtccttctacgaggcgcagggccggttgcgggggctcgacggggagattgttact
gcagtagggaggatccgcgagctcagggaagtggtgcgggtgctcacgggggacctcgtc
gggtcagcaaggcaggtgcaggagctcaatgccacgcggggcaaccttgtggcactgcag
cagaagcttactgtcatcctctacgtcagccaggcacttgctgcactcaagttgcttgtt
gcagcagcagattgtgctggtgcccttgatgtcatcgatgacttgcaaaatttactagat
actgatgaacttgctgggctttactgctttcgccatattcgggatcagctgggaacatca
ctagattcagtgaacagcattctttcagcagaattcgtgcacgctgctgttcctgatgga
aaagctgtagatgctatgatttcatcaaatgtaaaaagaaaggcttccagcccattgaat
gggacagaacatgagggtaacatagatgaggaggaaagttttattctcagagatcgactc
ctccccctcattatttgcctgctgagaacggacaaacttcctgcagttctcagaatctac
cgagatacacttattactgtgatgaaagcttcaatcaaagccacagttgcagagttgctt
ccagttttaactgccagaccaatagattctgattcagtaactggagacagggctgctgat
gctgacgctggaggccagtccttagcaaataagttgcgaagtctatcatctgaagggttt
gttcaacttttgtctgccattttcaggatagtacaggtacatttacagcaagcagctgag
gtgaaaagaattgttgagtggatcatgggaaaccttgatggaaccttaagtattgatgct
agcaatcctacagtacaacatggtggttcagttgtttctgatatttcccaagagaatgac
tacagtgtttcttcacgggtctctaatactctcacacggagtacttccaaaatcccattt
gtccaagcaaaagcaaatgatttgtccatcataaattcaataaagaatgtccgggctgat
gtattaagagaaaacactgaagcagttttcgctgcatgtgatgctgcccatgggcgatgg
gctaagctcctaggtgtccgtgctgctctacatcccaggttaaggcttcaggaattcttg
atcatctacaatataacagaagaatttatagctgctactgaaaaggttggaggcaggttg
ggttacaacattcgtggaatcctacagcaacagtcgaagcagtttgttgattatcagcat
agcgttcggatgacaaaaatcaaggcagttcttgaccaagagacgtgggttgctgttgat
gttcctgaagagttccaagcaattgttctatcactttcatccacttattcttctgttaat
ggcatggatatgcctggtgcagaagataactcaaagttcagtgatcctacgagtcaagaa
ccaacatattcaggtgaaaataatgctgataatggcaaattaacatctgcgataggtgaa
agcaaggttgagtccacttctcctcagactgaaaataatgccactgggaatcagaggtca
accttgcaaactattgtacatggaggtgttggctatcatatggtaaactgtggcttgata
ttgctgaagatgttatcagaatatgttgacatcagtaaatgtttgccatcattatctttt
gaggtggtccaacgtgttgtggaaatattaaagcttttcaacaacaggacttgccaactt
gtcctcggtgcaggcgccatgcaggtgtctggccttaaatcaattacgtctaagcattta
gctttggcaagtcaaataattagttttatacattctctaattccagatatcaggcgagta
cttttcctgaaaatacctgaggcacgcaaacagctgttaatgtccgaattggatagagtc
actcaggactacaaggttcatcgggatgaaattcacagcaagcttgtccagataatgagg
gagagattgcttgcaaatcttagaaaactaccccaaattgttgaaggctggaatggccca
gaggataatgatttgcagcctagtcaatttgctaaagctgttacaaaggaagtaaactat
ttgcatcgcatcctttctcaaacattgcttgaagtcgatgtgcaaacaatattcaggcaa
gtagttcaaatattccattctcacattacagaagcgtttagaaaattggaggtcagcact
cctcaggcgaagaacagattatgccgagatgttcagcatattcttacatgtatccggaag
ttaccagctgagaacttcagtgcagaaactactccaaattatggtcttcttgatgaattc
ttggctgagaactttgggacaaaagttggtattgctgtgcaggatagtgaaggaagagct
cccagatga
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