Setaria viridis (green foxtail): 117862412
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Entry
117862412 CDS
T07951
Name
(RefSeq) ABC transporter C family member 2
Organism
svs
Setaria viridis (green foxtail)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
MMR_HSR1
AAA_16
DUF87
AAA_29
Dynamin_N
RsgA_GTPase
TrwB_AAD_bind
AAA_23
Motif
Other DBs
NCBI-GeneID:
117862412
NCBI-ProteinID:
XP_034601767
LinkDB
All DBs
Position
7:complement(29420863..29433893)
Genome browser
AA seq
1629 aa
AA seq
DB search
MGFDPMDWYCQPVKHGAWSHVVENAFGPYTPCGIDTLVVCISHLALFGVCFYRIWRTTRD
YRVQRYKLRSPYYNYLLGLLLVYCIAEPLYRIATGTSIMNLDGQPGLAPFEIVSLIIESA
AWCCMLVMILLETRIYIYEFRWYIRFVVIYVLIGEAAMFNLVLSVRQYYSSSSIFYLYCS
EIVCQFLFGILMVVYLPSLDPYPGYTPIRNEELVDNTDYEPLPSGEQICPERHANIFSRI
FFSWMTPLMQQGYKRPITDKDIWKLDTWDETETLYSRFQKCWNDELRKPKPWLLRALHSS
LWGRFWLGGFFKIGNDASQFVGPLILNLLLESMQKGDPSWSGYIYAFSIFAGVSLGVLAE
AQYFQNVMRVGFRLRSTLIAAVFRKSLRLTNDSRRKFASGRITNLISTDAESLQQVCQQL
HSLWSAPFRIVISMILLYAQLGPAALVGALMLVLLFPIQTVIISKMQKLTKEGLQRTDKR
ISLMNEVLAAMDTVKCYAWEQSFQSKVQDIRDDELSWFRRAQLLAALNSFILNSIPVIVT
VVSFGVYSLLGGDLTPAKAFTSLSLFAVLRFPLFMLPNLITQVVNCKVSLKRLEDLLLAE
ERLLLPNPPIDPELPAISIKNGYFSWESQAERPTLSNVNLDVPVGSLVAIVGSTGEGKTS
LISAMLGEIPPVSGSDTSVVIRGSVAYVPQVSWIFNATVRDNILFGSPFQAPRYEKAIDV
TSLRHDLHLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSDSDVYIFDDPLSALDAHVG
RQVFDKCIKEELQHKTRVLVTNQLHFLPYVDKIVLIHDGVIKEEGTFDELSNSGELFKKL
MENAGKMEEQVEEKQDESKSQDVAKQTENGDVVIVDGGSQKSQDDSNKTKPGKSVLIKQE
ERETGVISAKVLSRYKNALGGVWVVSILFFCYALTEVLRISSSTWLSIWTDQGSLKIHGP
GYYNLIYGILSFGQVLVTLSNSYWLIISSLRAAKRLHDAMLRSILRAPMVFFHTNPLGRI
INRFSKDLGDVDRNVAVFVNMFMAQISQLLSTFVLIGFVSTMSLWAIMPLLILFYAAYLY
YQTTSREVKRLDSITRSPVYAQFSEALNGLSTIRAYKAYDRMANINGRSMDNNIRFTLVN
MSSNRWLAIRLETLGGIMIWFTATFAVMQNQRAENQKAFASTMGLLLTYTLNITNLLTAV
LRLASLAENSLNAVERVGTYIELPSEAPPVIEDHRPPPGWPSSGVIKFEDVVLRYRPELP
PVLHGISFIINGSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDTSKFGIWDLR
KVLGIIPQAPVLFSGSVRFNLDPFNEHNDADLWEALERAHLKDVIRRNALGLDAEVSEAG
ENFSVGQRQLLSLARALLRRAKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHR
LNTVIDCDRLLILSAGQVLEFDSPENLLSNEDSAFSKMVQSTGPSNAEYLKSLVFGSGEE
RSRREEIKLQDIQRRWVASNRWAEAAQFALARSLTSSHSDLLALEAAEGNNILRRTKDAV
ITLQSVLEGKHNSEIDESLNQYQVPADRWWSSLYKVIEGLATMSRLGRNRLQQPSYNFEN
NGSIDWDQM
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgacccaatggattggtactgccagccggtcaagcatggtgcttggtcgcat
gtggtggagaatgcattcggcccctacactccgtgtggcatcgacaccttggtggtgtgc
atctcacacctcgcactctttggtgtttgcttctatcgtatatggaggacaacgagggac
tacagagtgcagcgatacaagttacgttcaccgtactacaactatctgcttgggctgcta
ctggtgtactgcatagcagagccgctgtatcggattgccactggtacctccatcatgaac
ttggatgggcagccgggtcttgctccatttgagatcgtctcattgatcattgagtctgct
gcttggtgctgtatgcttgtaatgattcttctggagacaagaatttatatctatgagttc
agatggtacatccggtttgtggtcatttatgtgttgattggggaagctgctatgtttaat
cttgtgctctcagtgaggcagtactacagttcgagttcaatcttttacttatactgcagt
gagattgtatgccagttcttgtttggaattctcatggtggtttatctgcctagcttggat
ccttatccgggttatacccctatcaggaatgaggagctggtcgacaatactgattatgaa
cctcttcctagtggagagcagatttgccctgagagacatgccaacatattttccagaata
ttcttttcatggatgactcctctaatgcaacaaggatataaaaggcccatcacagataag
gatatttggaaactagacacctgggatgagactgaaactttgtatagccgattccagaaa
tgctggaatgatgagcttcgaaaaccaaaaccttggctgttacgagctcttcacagcagc
ctttggggaaggttctggctgggagggttttttaagattggcaatgatgcttctcaattt
gttggtccactcatattgaacctgttgttagagtctatgcaaaagggtgatccatcttgg
agcgggtacatctacgctttctcaatctttgccggagtgtcactgggagttcttgctgag
gcacagtacttccagaatgtcatgcgtgtcggtttcaggttgaggtccacattgattgca
gctgttttccgcaagtccttgcgactgactaatgatagtcgtaggaagtttgcttctggg
aggattaccaatttgatttcgactgacgctgagtcccttcagcaagtgtgccagcagctt
cacagcctatggtctgcgcctttccgcatagttatctccatgatccttctatatgcacag
cttggtcctgcagcattagttggtgcgctcatgttggttcttttgtttccaattcagaca
gtcatcatcagcaaaatgcaaaaacttaccaaggaggggttgcaaaggaccgacaagcga
atcagtctcatgaatgaagtgttagctgctatggatacagtcaagtgttatgcttgggag
caaagcttccagtcgaaggtgcaggacatccgcgatgatgagctttcttggttccgcagg
gctcagttgcttgctgcgctgaatagctttatcctgaacagtatcccggttattgtcact
gttgtttcatttggtgtatattctctactgggaggtgacttgacaccagcaaaggcgttt
acttctctttcattatttgcagtcttaaggtttccacttttcatgttgccgaatctgata
actcaggtggttaattgcaaggtatcattgaagcgcctggaagatctcctgttggctgaa
gagagattgcttctgccaaatccacctattgatcctgagcttccggccatttctatcaag
aatgggtatttttcatgggaatcacaggctgagagaccaactttatcaaatgtcaatctg
gatgtacctgttggaagtttagttgcaatagtaggaagtactggggagggtaaaacttct
ctcatatctgccatgcttggagaaataccaccagtgtcgggatcagatacctcagtggtc
attcgtggatcggtggcttatgttcctcaagtttcgtggatcttcaatgccaccgtccgg
gacaacatattgtttgggtctccttttcaagccccacgctatgagaaagcaatagatgta
acttcattgcgccatgaccttcacctactcccaggaggcgatctcacagagattggtgaa
agaggagttaatattagtgggggacagaagcaaagagtttcaatggcaagagctgtgtat
tcggattcagatgtatacatatttgatgatccactcagtgcattagatgcccatgttggc
cgtcaggtatttgacaaatgtatcaaagaagaactacagcataaaacacgggttcttgtt
accaatcagctgcattttctgccatatgtcgataaaatagtgctgattcatgatggtgta
attaaagaggagggcacttttgatgaacttagcaacagcggcgaactcttcaagaagctt
atggaaaatgctgggaaaatggaggaacaagtagaagagaagcaggatgaaagcaaatca
caggatgttgcaaaacaaactgagaatggggatgttgtaatagttgatggaggttcgcag
aagagccaggatgattctaataaaacaaaaccgggtaaatctgttcttattaagcaagag
gaaagggaaacaggagttatcagtgcgaaggtcctttcacgttacaaaaatgcactggga
ggggtgtgggtggtatccatactcttcttttgctatgcactgactgaagttcttcgtatt
tcaagtagcacatggttgagcatttggactgatcagggttctctgaaaattcatggccct
ggttactacaatttgatctatggaattctttctttcggacaggttctagtcactctctca
aactcttactggttgattatatcaagtcttcgggcagcaaaaaggctgcatgatgccatg
cttcggtcaatattaagagctcccatggtattttttcataccaacccacttggacggatc
atcaacagattttcaaaggatttgggtgacgttgacaggaatgttgctgtctttgtcaat
atgtttatggcacaaatatctcaattgctctcaacttttgttctcatcggatttgtcagc
actatgtctctctgggccatcatgccgctcctgattttgttttatgcagcttacctctat
taccagacaacatctcgcgaggtgaagcgtctggattccattaccaggtctcccgtgtat
gctcagttctcagaggctctgaatggtctgtccacaatccgtgcgtataaagcctatgat
agaatggcaaacataaatgggagatcaatggacaacaacattaggttcacactcgtgaac
atgagttcaaataggtggctagctattcgtctggaaacactgggtggcatcatgatatgg
ttcacagcaacttttgctgttatgcaaaatcaacgagcagagaatcagaaggcctttgca
tctacaatgggtctacttcttacttacactctcaatattaccaatttgctcacagctgtc
cttcgtcttgctagtcttgctgaaaatagtttaaatgctgttgaacgggtgggaacatac
attgagttgccttctgaagctccccctgtcattgaggaccataggccaccccctggttgg
ccatcatcaggtgtcatcaagtttgaagatgtcgttcttcgatatcgaccagaacttcct
cctgttcttcatggcatatctttcattattaatggaagtgagaaagtaggaatagttggc
agaacaggtgctggtaaatctagcatgctcaatgctttgtttcgtatcgtggagcttgaa
agagggaggatattgatcgatgattgtgacacttccaagtttggaatttgggacctgcgc
aaagttctaggaataataccacaagcaccagttctattttcaggttctgttcgatttaat
ctggatccttttaatgagcacaacgatgcggatctctgggaggctctggaaagggctcat
ctaaaggatgttatcaggaggaatgctcttggactagatgctgaggtttctgaagctggt
gaaaattttagtgttggacaacggcagctgttgagcttagctcgtgcgctgctgagaaga
gcaaagatacttgttcttgatgaggcgacagcagcagttgatgtacggactgatgctctt
attcagaaaaccatccgagaagaattcaagagttgcacaatgctcataattgctcaccgt
ttgaacactgtcattgactgtgacaggttgcttattctaagtgctgggcaggttctggaa
tttgactcacctgagaatcttctgagcaatgaggacagtgctttctccaagatggtgcag
agtacaggacctagcaacgcagaatatctcaagagtcttgtattcggaagtggagaggag
agatcacggagagaagaaatcaagctgcaagatattcaaaggagatgggtggcttctaat
cgatgggcagaagctgcccaatttgcgcttgctagaagcctcacatcatcacacagtgac
ctcctcgccctagaagctgctgagggaaataatatcctcaggagaacaaaggatgctgta
atcactctgcaaagtgttctagaagggaagcacaattctgaaattgatgaatccctaaat
cagtatcaggtcccagctgaccggtggtggtcatcgctttacaaagtcatcgaaggcctc
gccacgatgagcagattgggccgcaaccgcctgcagcaaccttcctacaattttgagaac
aacggttctattgactgggaccaaatgtag
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