Setaria viridis (green foxtail): 117862471
Help
Entry
117862471 CDS
T07951
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117862471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117862471
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117862471
FA (Fanconi anemia) pathway
117862471
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
117862471
NCBI-ProteinID:
XP_034601841
LinkDB
All DBs
Position
7:complement(17178171..17184930)
Genome browser
AA seq
776 aa
AA seq
DB search
MRRRNLIVDSDEDEDEDDGMGTVTPASASASAAASASASVASGGGSGSVGRPSPQNPRPL
PVPFPSLSQSFDPVVISDDDDEEEVDEIVDSDGDSPIVDAPEVASPPFPPAPTSAPPPTT
TPFRTPNPTPPPARTPTPTPPPPAPAPPPTTTPFRTPTPTLPPARTPTPTPLSAAPPHPT
PPPSALSGRLRPVYELLRGLGLRLRPEWLESCAAGIPGFDGLGGAEAQARRCFEQFLFAD
MNACGAGVLPEGVGGMHAAVLDGPFVLQVDEIVNMSAPLKERYRDAHAGPKRCLKLSMTD
GMQRIFGMEYRPIKDLAVLAPAGLKIVIRNVHIRRGLLMLVPEVIEILGAVVDELEAARG
RLVSEVNKPPRGKRKQGGLPLSSRATLAAWPCSTNVTDGGEQGISMPRAVNSSRPTGLGT
IWPCSTNVTNGGEQGISIPRAVNSSHPTGLGNTFQGRSTETLVEEHVSPPVVVNTVQEQI
QYVQEINMEDPSTFHTMKNTETSAHTTHEYDHTHIIERSTQTVVEQCVDPPIRANNAHEQ
IQHVPEITKQEQSTAFGTTEGTLSVSTPFGCDSQRGSHVIEGTTANDVEAARSPNVDRIN
QMEHSFILNGENEKPYTYICSMFSDWGTQQDTKAYIQGKIKGLITSVKRFQYRRRTTYEL
YVYIDDGSFISEAFVDHNIVENMLGLSPGEVTAALAGEFEFASASEVKETLRGFQSFLIN
FEGMMLIEFNKDSSIPIIRELDEGCSSSNAWLLLQRLKMFSSQRRIRSLDAMDTTP
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgccggaacctaatcgtcgattccgacgaggacgaggacgaggacgacggcatg
ggcacggtcacccccgcatccgcctccgcctccgccgccgcctcggcctcggcctccgtc
gccagcggcggcggcagcggaagcgtcggccggccctcgccccaaaaccctcgccccctc
ccggtccccttcccctccctctcgcagtccttcgaccccgtcgtgatctccgacgacgac
gacgaggaggaggtcgacgagatcgtggactccgacggggattcccccattgtcgatgcc
cccgaggtcgcctccccgccgtttcctcccgctcctacttccgctccccctcctaccact
accccatttcggaccccaaacccaactccacctcctgcccggaccccaaccccgactccg
cctcctcccgcgccggctccccctcctaccactaccccgttccggaccccaactccgact
ctacctccggcccggaccccaaccccgactccgctttcagcagcgcctccgcacccgacc
ccgccgccgtcggcgctgagcgggcggctgcgtccggtgtacgagctcctgcgggggctc
gggctgcggctgcggccggagtggctcgagtcctgcgccgcgggcattcccgggttcgac
ggcctcggaggcgcggaggcgcaggccaggcggtgcttcgagcagttcctcttcgccgac
atgaacgcctgcggggctggcgtgctcccggagggcgttgggggcatgcacgccgccgtc
ctcgatggccccttcgtgcttcaggttgatgaaattgtcaacatgtcagctcctttaaag
gaaagatatcgtgatgcgcatgcgggaccaaaacgatgcttaaaactgtcaatgacagat
ggcatgcaacgcatatttggaatggagtacaggcctatcaaagatctggcagttctagct
cctgctggactaaagattgttataaggaatgtgcacataaggaggggtcttcttatgcta
gttcctgaggttattgagattcttggggccgtagttgatgaattggaagcagcgcgtggt
agacttgtttctgaagtaaacaaaccacctcgtggcaaaaggaaacaaggtgggttgcct
ttgtcttcaagagccaccctagctgcctggccatgtagtacaaatgttacagatggtggt
gagcaagggatctcaatgcctagagcagttaattcctctcgtccaacaggattaggtact
atatggccatgtagtaccaatgttacgaatggcggtgagcaagggatctcaattccacga
gcagttaattcctctcatccaacaggattaggtaacactttccagggtagaagtacagaa
actttggttgaagagcatgttagccctcctgtagtagtaaacactgtccaagagcaaatt
cagtatgtccaagaaatcaacatggaggacccatctacttttcataccatgaaaaataca
gaaacgtctgcacatactacccatgaatatgatcacactcatatcattgaaagaagtaca
cagaccgtcgtagaacaatgtgttgaccctcctattagagcaaacaatgcccatgaacaa
atacagcatgtcccagaaatcaccaagcaggaacagtctactgcttttggtacgacggaa
ggaacattgtctgtatctaccccttttgggtgtgattcccaacgtgggtcacatgttatt
gaaggcactactgctaatgatgtggaggctgcacgatctccaaatgttgacaggataaat
cagatggaacattcttttattctaaatggtgaaaatgaaaaaccatatacatacatttgc
agcatgttttctgactggggtacacaacaggatacaaaagcctacattcaaggaaagatc
aagggtctgatcacttctgttaaacgtttccaatatagacgacgcacgacatatgagctt
tatgtatatatagatgatgggagttttatttctgaggcctttgttgaccataatattgta
gaaaacatgcttggtctttctcctggagaggtcactgcagctcttgctggtgaattcgag
tttgcatcagccagtgaagtaaaagaaactctgagaggatttcagagttttttgataaat
tttgagggtatgatgcttatcgagttcaacaaagactcctctattcctatcatacgtgag
ttggatgaaggctgttcaagttctaatgcatggcttctgctgcaaaggctgaaaatgttt
tcttctcaaagacgcatacgaagtctggatgctatggataccactccatga
DBGET
integrated database retrieval system
