Setaria viridis (green foxtail): 117862485
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Entry
117862485 CDS
T07951
Name
(RefSeq) cycloartenol synthase isoform X1
KO
K01853
cycloartenol synthase [EC:
5.4.99.8
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00100
Steroid biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
117862485
Enzymes [BR:
svs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.8 cycloartenol synthase
117862485
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GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
117862485
NCBI-ProteinID:
XP_034601862
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Position
7:complement(22077472..22088505)
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AA seq
759 aa
AA seq
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MWRLKVAEGGGPWLWSTNNFAGRQVWEFDPDHGTAEERAQVEEARRGFADHRFELRDSAD
HLMRLQFAKANPLKLDLSATKLEEEEDVTEEAVSTSLRRAISRLSTLQAHDGHWPGDYGG
PMFLIPGLIITLYVTEAMSAVLSSEHQKEIRRYLYNHQNEDGGWGLHIEGPSTMFGSVLN
YVSLRLLGESPSGGDGAMEKGRNWILGHGGATLTTSWGKFWLSVLGVFHWSGNNPVPPEV
WLLPYCLPFHPGRLWSHCRLVHLPMSYIYGKRFVGPITQVVLDLRKELFRDAYDEINWDK
VRNQCAKEDLYCPHSFVQDILWAALHKFVEPVMLDWPGSKLRKKALDIVMQHIHYGDENT
RYICIGSVNKVLNMLACWIEDPNSEAFKLHIPRVYDYLWLAEDGMKMQGYNGSQLWDTAF
TVQAILAADLIEEFGPTLKLAHDYIKNSQFLDDCPGDLNYWYRHISRGGWPFSTVDQGWP
ASDCTAEGLKTSLLLSKISPEIAGKPVETNRLYDAVNCLMSYMNDDGGFATYELTRSYAW
LELINPSETFEDIMIDYPHVECTSSAIQALASFRKLYPGHHRKKVDNCIIKAANFIESAQ
RSDGSWYGSWAVCFTYGTWFGVKGLTAAGWTFRNSPAIRKACDFLLSKQLPCGGWGESYL
SSQNQVYTDLEGRRPHLVNTSWALLALIDAGQAERDPVPLHRAAKVLINLQSEDGGFPQQ
EISGVFNRNCMISYSQFRTIFPVWALGEYRCRVLAKAKH
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggctgaaggtggcggagggcggcggcccgtggctgtggtcgacgaacaacttc
gccggccggcaggtgtgggagttcgaccccgaccatggcacggcggaggagagggctcag
gtggaggaggcacgacgggggttcgccgaccaccgattcgagctgagggattccgccgat
catctcatgcgccttcagttcgcaaaagcaaatcctcttaagcttgatctttcagctacc
aagctggaagaggaagaagatgttacagaggaagctgtatcaacctctttgagaagggca
atcagccgcttgtctacacttcaggcacatgatgggcactggcctggcgattatggtggt
cctatgtttcttattccaggcttgattataacattatatgtcactgaagcaatgagcgca
gttttgtcatcagaacatcagaaggagatccgtcggtatctctacaatcatcagaatgaa
gatggaggctggggattgcacattgagggcccaagcaccatgtttggctcagtcttgaac
tatgttagtttaagattgcttggagagagtcccagtggtggagatggagctatggagaaa
ggtcgaaattggatcttaggccatggaggagcaacacttacaacatcatgggggaagttt
tggctctcagtacttggtgtatttcactggtctggcaacaacccggtgccacctgaagta
tggctgctgccatattgcttgccatttcacccaggtcgattatggagtcattgccgactg
gtgcatttgcccatgagttacatttatggaaagaggtttgttggcccaattacccaagtt
gtgttggacttaaggaaggaactctttagagatgcctacgatgagattaattgggacaaa
gttcgtaatcagtgtgctaaggaagatctttactgtccacactcattcgttcaggatatc
ttatgggccgctctccataagtttgttgaaccagttatgttggattggcctgggagcaaa
ttgaggaagaaagctttggatatagtcatgcagcacattcattatggagatgagaacact
agatacatttgcattggctctgtaaacaaggtattgaatatgcttgcttgctggattgaa
gatccgaactcagaggcattcaaactccatattccacgagtatatgattacttgtggctt
gctgaagatggcatgaagatgcagggttacaatggcagccagctatgggacacagctttc
actgtccaagccattctggctgctgaccttatcgaagagtttggtcccacactaaaacta
gcacatgactacattaagaattcacagtttcttgatgactgccctggagatctgaactac
tggtaccgccacatatccagaggtgggtggcccttttctacagtggatcaaggttggcct
gcatcagattgcactgcagaaggattaaagacttctttgttattatcaaagatttctcct
gaaattgctggcaaaccagtggaaaccaatagactttatgatgctgtcaattgtttgatg
tcttatatgaatgatgatggtggctttgcaacgtatgaactcacaaggtcctatgcatgg
ctggagcttattaatccttccgagacttttgaggacataatgattgattacccgcatgtt
gaatgtacgtcgtcagcgattcaggccctggcatctttcagaaaactctaccctggccac
cacagaaaaaaggtggacaactgcattatcaaagctgctaatttcatcgagagtgctcaa
agaagtgatggttcctggtatggttcatgggctgtttgtttcacctacggcacttggttt
ggagtgaagggattgacagctgctggttggacgttcaggaacagtcctgcaatcagaaag
gcatgtgactttctgttgtcaaaacagcttccttgtggtggctggggagaaagctatttg
tcatcacaaaaccaggtttacactgatcttgaaggcaggcgacctcatttagtaaacact
agttgggcccttttggccctaattgatgcaggacaggctgaaagagatccagttcctcta
catagagctgcaaaggttttgatcaacttacaatcagaggatggtggatttcctcagcaa
gagatctcgggagtgttcaacagaaattgcatgatcagttactcccagttcaggaccatc
ttccctgtatgggccctcggagagtaccgttgccgggtcctggcaaaagccaagcactag
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