Setaria viridis (green foxtail): 117862628
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Entry
117862628 CDS
T07951
Name
(RefSeq) organic cation/carnitine transporter 4
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117862628
Transporters [BR:
svs02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
117862628
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
117862628
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Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
TMEM234
DUF1304
DUF5917
Motif
Other DBs
NCBI-GeneID:
117862628
NCBI-ProteinID:
XP_034602020
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All DBs
Position
7:29936031..29939393
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AA seq
518 aa
AA seq
DB search
MSTTEPLLPAGDAAAGGKKKEGNRRVCIDDALTMHAGEFGRWQLRHFVLVSAAWALEALH
TMVIIFADREPAMVCGAVGGCGDRCAGAAAGWEWADGAASSTVAEWGLVCGERYKVGLAQ
AIFFAGCMIGAGVFGHLSDSFLGRKGSLQVVCVLNATFGLLTALAPNYWAYAALRLLTGF
STGSVGVLAFVLATEPIGPSRRGAAGMSTFYFFSGGIAALAGVAALFPRSWRALYVVTSL
PSLAFVAAVVPFVSESPRWYLVRRRADDAMRVLRAIAVANGRTVPDDVTLKLDDEDEEGT
KGVDDESANSSSSSGSIVDVFRSRTTRARLVLSVLINLLASVVYYGLSLNVVNLKTNLYV
SVVVNSLAEMPAYLLTALLLDRFGRKPLAIGTMLLSGIFCTAGSLIAGAGILRVVRMACG
VVGIFGMAATYNLLFIYTAELFPTVVRNAALGCTAQAAQMGAIVAPLVVVLGERVPFAVF
GASGIVGGLLVFYLPETMNKPLYDTMAGLEEGEKSLLG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgacggagccgctcctcccggccggcgacgcggccgccggaggcaagaagaag
gagggcaacaggcgcgtgtgcatcgacgacgcgctgacgatgcacgctggggagttcggg
cggtggcagctgcggcacttcgtgctggtgtcggcggcgtgggcgctggaggcgctgcac
accatggtgatcatcttcgcggaccgggagccggccatggtctgcggcgccgtcggaggc
tgcggcgatcggtgcgcgggcgccgcggccgggtgggagtgggccgacggcgccgcctcg
tccaccgtcgccgagtgggggctcgtctgcggcgagcgctacaaggtcgggctcgcccag
gccatcttcttcgccggctgcatgatcggcgccggcgtgttcgggcacctgtcggactcg
ttcctgggccgcaagggctccctgcaggtggtctgcgtcctcaacgccaccttcggcctc
ctcaccgcgctggcacccaactactgggcctacgccgcgctgcgcctcctcacgggcttc
agcaccggcagcgtcggcgtgctcgccttcgtcctcgccaccgagcccatcgggccctcc
cgccgcggcgccgcggggatgtccaccttctacttcttctccggcggcatcgcggcgctc
gcgggcgtcgccgcgctcttcccgcgctcctggcgcgcgctctacgtcgtcacctcgctc
ccgtccctcgccttcgtcgccgccgtcgtgcccttcgtctccgagtccccgcggtggtac
ctcgtgcgccgccgggctgacgacgccatgcgcgttctccgcgccatcgccgtcgccaac
gggaggaccgtccccgacgacgtcacgctcaagctcgacgacgaggacgaggaagggacg
aagggcgtcgatgatgagtcggcgaactcttcgtcgtcttcgggatccatcgtcgacgtg
ttccggtcgcgtaccacgcgggcccgcctcgtgctctcggtgctcatcaacctcctggcg
tcggtggtgtactacggcctcagcctcaacgtggtcaacctcaagaccaacctctacgtc
agcgtcgtcgtcaactcgctcgccgagatgcccgcctacctgctcaccgcgctgctcctc
gaccggttcgggcggaagccgctcgccatcggcaccatgctgctcagcggcatcttctgc
accgccgggagcctcatcgccggtgcaggcatcttgagggttgtgcggatggcttgcggc
gtggtgggcatcttcggcatggcggcgacgtacaacctgctgttcatctacacggcggag
ctgttcccgacggtggtgcggaacgcggcgctggggtgcacggcgcaggcggcgcagatg
ggggccatcgtggcgccgctggtggtggtgctcggggagagggtgccgttcgcggtgttc
ggcgcgtcgggcatcgtcggcgggctgctggtcttctacctgccggagaccatgaacaag
cccctgtacgacaccatggccgggctggaggaaggggagaagagcctgctgggctga
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