Setaria viridis (green foxtail): 117862875
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Entry
117862875 CDS
T07951
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117862875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117862875
Spliceosome [BR:
svs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117862875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
117862875
NCBI-ProteinID:
XP_034602306
LinkDB
All DBs
Position
7:26016291..26021810
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AA seq
485 aa
AA seq
DB search
MASLADSFLADLDELSDNEGYPEEDNAEAAGMEEDGDDDMPDLESLNYDDLDSVSKLQKT
QRYNDIMQKVEDALQKGTDFSNQGSILEEDPEYQLIVDCNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL
SEENLEKTVEACDRALTLDTAKKKVLDFVESRMGYIAPNLSAIVGSAVASKLMGTAGGLG
ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTEVFQSTPPALRTRACRLIAAKS
TLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRL
RKMKERYAQTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAAK
VAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAQGNPLGGGTQSTYFSETGTFSK
IRRTQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccttgccgattcttttctagcggatcttgatgaactgtcagacaatgaaggc
tatcctgaagaagacaatgctgaggcagctggtatggaggaggatggtgatgatgatatg
cctgaccttgagtctcttaattatgatgatctagatagcgtctcaaagttgcagaagaca
caacgctataatgacataatgcaaaaagttgaagatgcacttcagaaaggcactgacttc
tccaatcaaggttccatcctggaggaggatccagagtaccagctaattgttgattgcaat
gctttgtccgtagatattgagaatgaaatcatcataatccataatttcatacgtgacaag
tataggttgaaatttcctgaactggagtccctcgttcatcatccgattgattatgcccgt
gttgtcaaaaagattggaaatgagatggacttaacacttgtagatctggaagggctttta
ccttctgcaattataatggttgtctcagtgacagcatcaacaacaagtgggaagcctctt
tccgaggagaatttggaaaaaactgttgaagcatgtgacagagcccttaccctcgatact
gcaaagaagaaagtgcttgattttgtagagagcagaatgggttacattgcaccaaacctt
tctgctattgttggtagtgctgttgcctcgaaactgatgggtaccgctggtggtctggga
gcgcttgcaaaaatgcctgcttgtaatgttcagttacttggtgcaaagaggaaaaatctt
gctggattttctactgccacatctcagtttcgtgttggctatcttgaacaaactgaagta
tttcagagcacacctccagctctgaggactagggcgtgcaggcttattgctgcgaagtca
actctagcggcaagaattgattcaattagaggtgatccaactggaaaagctgggcggaac
ttgttagaagaaattcgtaagaagatcgagaagtggcaagaaccgcctcctgcaaagctt
ccaaagccacttcctgttcctgactctgagcctaaaaagaagagaggaggtcgtcggctt
cgaaaaatgaaagaaagatatgcgcaaactgatatgatgaagcttgccaaccggatgcaa
ttcgggattccagaggagagctcattaggtgatggcttgggggaaggttatggcatgctc
ggacaggcaggaagtggcaagctgcgtgtttcagctggacaaagcaagcttgctgctaaa
gtggcgaaaaaattcaaggagaagagctatggtagcagcggtgcaacttcaggattgaca
tctagtttggcatttacaccagttcagggaatagagttgtcaaatccacaggcccaaggg
aacccgcttggaggtggaactcaaagtacctacttttctgagactggcacattttcgaag
atcagaaggacccagtag
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integrated database retrieval system
