Setaria viridis (green foxtail): 117863086
Help
Entry
117863086 CDS
T07951
Name
(RefSeq) transcription factor efuD
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117863086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117863086
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
117863086
Prokaryotic type
Archaeal type
TFE
117863086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
PNMA
Motif
Other DBs
NCBI-GeneID:
117863086
NCBI-ProteinID:
XP_034602561
LinkDB
All DBs
Position
7:complement(34563885..34568105)
Genome browser
AA seq
363 aa
AA seq
DB search
MPKQSGEGHTAPTAASAVAEAGGGEAFPRPLSTADMDAIGPFARLVRLLGRGFYTDVIIR
DGEVTTAACDDNRGLAVVVLDNLTRFAWIKENELAKLLKMKEKNLILLLQFLEEEKLLKR
ELIKGTQVKINDAIAEKEDGKFNVFTGSYCCLDYSQVLDVTRYRLNHMKQSIKDKLDCAA
MIQEYICCICERSYSALDVVHLISNSGNTFRCENCKGELSAQIGDDSARRESRAKYANML
KRLKEQLKPIELQLHILKNLSVPDFRTVEQWTQTNMVEYVADSSSNNICETKVEIPLPNI
SAKLDDTESDCLAGVKVLPMWIIQKGMCSQEKDQIKDERRVGLKAKRRDGCSGGEFGASS
RRT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcaaagcggcgaagggcacacggcgccgaccgcggcctctgccgtcgccgaa
gctggtggaggcgaagctttcccgcggcctctatccaccgccgatatggacgcgatcgga
cctttcgcgcgcctcgtgagattgctggggcggggcttctacaccgatgtgatcatcagg
gatggggaggtgacgactgctgcgtgcgacgacaaccgcggcttggccgtcgtcgtcctc
gacaatctgacgcgatttgcatggataaaggaaaatgaactagcaaagttgttgaagatg
aaagagaaaaatctgatattgcttctccaatttctggaagaagagaagttactgaaaaga
gaattgataaagggaacacaagtgaagatcaatgatgctatagcagagaaggaagatggg
aagttcaatgttttcacagggtcctactgctgcttggactactcacaggtactcgacgtt
accagatatcggctgaatcatatgaagcaatccattaaagacaaattggattgtgcagca
atgattcaggagtacatttgttgtatttgtgaaagaagttactccgcacttgatgttgtt
catcttataagcaacagtgggaacactttccgctgtgaaaattgcaaaggagaattatct
gcacaaataggagatgacagtgccagaagggaaagccgtgcaaagtatgcgaatatgcta
aagagattgaaggaacaattgaaaccaatagaattgcaactccatatattgaagaacctg
tctgtcccagacttcaggactgtagaacaatggacacagacaaatatggtcgaatatgtg
gctgattcatcaagcaacaacatttgtgagaccaaggttgaaattcctttaccaaatatt
tctgcaaaactggatgacactgaatctgactgtcttgcgggagtgaaagtcttgcccatg
tggataattcagaagggaatgtgctcacaagagaaggatcagataaaagatgaaaggcgg
gttggattgaaagccaagcgcagggatggctgttctggtggtgaatttggtgcgagctca
aggaggacttaa
DBGET
integrated database retrieval system