KEGG   Setaria viridis (green foxtail): 117863086
Entry
117863086         CDS       T07951                                 
Name
(RefSeq) transcription factor efuD
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117863086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svs03021]
    117863086
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     117863086
 Prokaryotic type
  Archaeal type
    TFE
     117863086
SSDB
Motif
Pfam: TFIIE_alpha PNMA
Other DBs
NCBI-GeneID: 117863086
NCBI-ProteinID: XP_034602561
LinkDB
Position
7:complement(34563885..34568105)
AA seq 363 aa
MPKQSGEGHTAPTAASAVAEAGGGEAFPRPLSTADMDAIGPFARLVRLLGRGFYTDVIIR
DGEVTTAACDDNRGLAVVVLDNLTRFAWIKENELAKLLKMKEKNLILLLQFLEEEKLLKR
ELIKGTQVKINDAIAEKEDGKFNVFTGSYCCLDYSQVLDVTRYRLNHMKQSIKDKLDCAA
MIQEYICCICERSYSALDVVHLISNSGNTFRCENCKGELSAQIGDDSARRESRAKYANML
KRLKEQLKPIELQLHILKNLSVPDFRTVEQWTQTNMVEYVADSSSNNICETKVEIPLPNI
SAKLDDTESDCLAGVKVLPMWIIQKGMCSQEKDQIKDERRVGLKAKRRDGCSGGEFGASS
RRT
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgccgaagcaaagcggcgaagggcacacggcgccgaccgcggcctctgccgtcgccgaa
gctggtggaggcgaagctttcccgcggcctctatccaccgccgatatggacgcgatcgga
cctttcgcgcgcctcgtgagattgctggggcggggcttctacaccgatgtgatcatcagg
gatggggaggtgacgactgctgcgtgcgacgacaaccgcggcttggccgtcgtcgtcctc
gacaatctgacgcgatttgcatggataaaggaaaatgaactagcaaagttgttgaagatg
aaagagaaaaatctgatattgcttctccaatttctggaagaagagaagttactgaaaaga
gaattgataaagggaacacaagtgaagatcaatgatgctatagcagagaaggaagatggg
aagttcaatgttttcacagggtcctactgctgcttggactactcacaggtactcgacgtt
accagatatcggctgaatcatatgaagcaatccattaaagacaaattggattgtgcagca
atgattcaggagtacatttgttgtatttgtgaaagaagttactccgcacttgatgttgtt
catcttataagcaacagtgggaacactttccgctgtgaaaattgcaaaggagaattatct
gcacaaataggagatgacagtgccagaagggaaagccgtgcaaagtatgcgaatatgcta
aagagattgaaggaacaattgaaaccaatagaattgcaactccatatattgaagaacctg
tctgtcccagacttcaggactgtagaacaatggacacagacaaatatggtcgaatatgtg
gctgattcatcaagcaacaacatttgtgagaccaaggttgaaattcctttaccaaatatt
tctgcaaaactggatgacactgaatctgactgtcttgcgggagtgaaagtcttgcccatg
tggataattcagaagggaatgtgctcacaagagaaggatcagataaaagatgaaaggcgg
gttggattgaaagccaagcgcagggatggctgttctggtggtgaatttggtgcgagctca
aggaggacttaa

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