Setaria viridis (green foxtail): 117863173
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Entry
117863173 CDS
T07951
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117863173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117863173
03036 Chromosome and associated proteins [BR:
svs03036
]
117863173
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117863173
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117863173
PBAF complex
117863173
GBAF(ncBAF) complex
117863173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
117863173
NCBI-ProteinID:
XP_034602674
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All DBs
Position
1:complement(4812967..4816896)
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AA seq
497 aa
AA seq
DB search
MATTTATVTAPAPAPAANANFVPTPTAPHPRPAAPPASRAPSTLGPVKSEAPPAPSSTTS
AAAAASGPEDPSYIITVPSYSAWFSFDSIHDTERRLLPEFFEGEAAAASGCRGPGAYKYY
RDTLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEWGLINYGALPSGSKQAKEK
REEAAPQPSLPSGATAPRKLCTGCRSVCGLAYYACDKADISLCARCFVCNNYRPGLTAAN
FKRIEITEDAKSDWTDKETLHLLEAVLHYGEDWKKVSEYVGSRSEKDCIARFIRLPFGEQ
FMGPKEDRMGFENDGDITDEPGAHVSKRLRLTPLADASNPIMGQVAFLSAIVGSDAASAA
AQAAISAQSHVDLNDGEIDSSINSAMEEESSHTNGLSVNDLLKEAATNARAQLEKERSNI
EQSLSDIVDVQMKEIQDKICRFEHKEMLMEKERQQLRCLRDLLFADQLTVMQHHRRPQAV
ATESKLDEKPKPVVNIS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacgacggcgacggtgacggcgccggcgccggcgccggcggccaacgccaac
ttcgtgccgacaccaacggctccgcatccacgccccgcagcaccacccgcttcccgggcc
ccctccaccttgggtcccgtcaagtcggaggcccctccagccccctcgtccactacctcc
gccgccgccgccgcatccggaccggaggatccatcctacatcatcaccgtcccaagttat
tcagcgtggttctcgttcgactccatccacgacactgagcgccgcctcctgccggagttc
ttcgagggggaggccgcggcggcgtccgggtgccggggcccgggcgcgtacaagtactac
cgcgacaccctgatacggaggttccgggcgcggccgggtcgacggctcacgcttacggag
gccaggcggggacttgttggcgatgttggctccgtccgccgcgtcttcgacttccttgag
gaatgggggctcatcaactatggtgctttgccgtcgggctcaaagcaggcgaaagagaag
agggaagaggctgcgccacagccgtcattgccttctggggcaacagcacccaggaagctt
tgcactggttgccgctctgtgtgtgggcttgcttactacgcctgcgataaggcggatata
agtctctgtgctagatgctttgtatgtaataactaccggccgggtctgactgctgcaaac
ttcaagagaatcgaaattactgaagatgcaaaatcagattggacagacaaagaaactctt
cacttgcttgaggctgtcttacattatggcgaggactggaaaaaggtgtctgagtatgtt
ggtagtcgatcagaaaaagactgcattgcaagattcatccgattaccttttggagaacag
ttcatgggacctaaggaggatagaatggggtttgagaatgatggcgacattactgatgag
cctggagcacatgtctcaaaacgactacgtctcactccactggcagacgcaagcaatcca
attatgggtcaggttgcattcttatcagccattgtgggttcagatgcggcctcagctgca
gctcaagcagctatttctgcacaatcccatgttgatctaaatgacggtgagattgattct
tcaataaatagcgccatggaagaagaatcgtctcacacaaatgggctttcagttaacgat
ttgctcaaagaggctgccactaatgcacgggcacaacttgagaaggaacggagcaacata
gagcaatctttatctgatatagtggatgtccagatgaaggaaatccaagataaaatatgc
cgttttgaacacaaggagatgctgatggagaaagagcggcagcagctccgctgcctgagg
gatttgcttttcgcagatcaactgacggtcatgcaacatcatcgccggccccaagctgta
gccacagagagcaaacttgatgagaagccaaaacccgttgttaacataagttga
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