Setaria viridis (green foxtail): 117863179
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Entry
117863179 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117863179
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117863179
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
117863179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-RING-like
zf-RING_Vps41
zf-C3H2C3
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
117863179
NCBI-ProteinID:
XP_034602678
LinkDB
All DBs
Position
7:27692056..27693832
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AA seq
380 aa
AA seq
DB search
MSSSTSSLQPPPAAAIGGTSPYSASSSFLPSFMIIAALLAFVFLASVSIHLLLRFLSDRS
SSSPSSAGPSLPRTHRDGEAAGSTGSAAGDSAPRPPAAAAAEGAGKKEEAPADEKQRLID
SLPLFTMASALAALPKSSPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRTTPSCP
LCRAAVAPLHPSLTAAMLAAAQQQQQPAQRGRPGSSFLVEIGTVSNRGSSPAAARGGGDR
NSRTYSLGSFNYQIDEEVEAVVSRVARIIAARESSTVKEDKPPAEEGSAPAPAPSPPGEA
VAEAAGSSRGWLREYVDRLASSAYTFSERWSSRWSQGGQQRQEEPWLWDAEAAAGMSAPP
GSDDEEETAFMVMYRWIAGV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctccacctcttctctccagccgcctcccgccgccgcgatcggcggcacctcc
ccctactccgcgtcctcgtcgttcctcccgtccttcatgatcatcgcagcactgctcgcc
ttcgtcttcctcgcctccgtctccatccacctcctgctccgcttcctctccgaccgctcc
tcctcctcgccgtcgtccgccggtccttcgctcccccggacccaccgcgacggcgaagct
gcgggctcgaccgggagcgcggcgggtgattccgcgccgagaccacccgcggcggccgcg
gccgagggcgcggggaagaaggaggaggccccggccgacgagaagcagcggctgatcgac
tcgctgccgctgttcacgatggcgtcggcgctggcggcgctgcccaagagctcgcccgac
tgcgcggtctgcctgtccccgttcacgcccgacgcggagctgcggctgctcccggcgtgc
cgccacgcgttccacgccgcctgcgtcgacgcttggctccgcaccacgccgtcctgcccg
ctctgccgcgccgccgtcgcgccacttcacccctcgcttaccgccgccatgctcgccgcc
gcgcagcagcagcagcagccggcgcagaggggccggcccgggtcgagcttcctcgtggag
atcggcaccgtcagcaaccgcggctcgtcccctgcggccgcccgcggcggcggcgacagg
aacagccgcacctactcgctcggctccttcaactaccagatcgacgaggaggtggaggcc
gtggtgtcccgcgtcgcgcgcatcatcgccgcgagggaatcgagcaccgtcaaggaggac
aaacccccggccgaggaggggtcggcgccggcgccggcgccgtcgcctcccggcgaagcg
gtggccgaggcggcgggctcctcgcgcgggtggctgcgggagtacgtggaccggcttgcc
tcgtcggcctacacgttctccgagcggtggagctcgcggtggagccagggaggtcagcag
cggcaggaggagccttggctgtgggacgcggaggccgccgcggggatgtcggcgccgccg
gggtcggacgacgaggaggagacggcgttcatggtcatgtaccgctggatcgccggggtg
taa
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