Setaria viridis (green foxtail): 117863375
Help
Entry
117863375 CDS
T07951
Name
(RefSeq) eukaryotic translation initiation factor 4B1
KO
K03258
translation initiation factor 4B
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117863375
03012 Translation factors [BR:
svs03012
]
117863375
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117863375
mRNA cycle factors
Stress granule specific factors
117863375
Translation factors [BR:
svs03012
]
Eukaryotic type
Initiation factors
eIF-4
117863375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-4B
FapA
Motif
Other DBs
NCBI-GeneID:
117863375
NCBI-ProteinID:
XP_034602939
LinkDB
All DBs
Position
7:22100292..22104565
Genome browser
AA seq
530 aa
AA seq
DB search
MSKPWGGVGAWALDAERAEEEEREQAAALPAPEPPAPAGGAASFPSLREAAAATGGGKSK
KKNKGTTLSLSEFTTYGAAAAHRRAAPVEPRGLTPEEMMMLPTGPRERSAEELDRSRGFR
SYGGGGGFGGGERRGGFDDEGRRGPGRSSDLDMPSRADEVDDWGAGKKFTPAAADSGRRD
RFGGPSPLGRADDIDDWSRDKKPLPSRYPSLGSGGGGGFRSSPGFRDSPGFRDSAASSDS
DRWVRGATPLPHNGEGMGERPRIVLNAPKRDPSATTTPPAEVARNRPSPFGAARPREDVL
AEKGVDWRKIESEIEQKTSRPTSSHSSRPNSAHSSRPGSPGSQVSAVGSEGAPRARPKVN
PFGDAKPRELVLQEKGKDWRKIDLELEHRAVNRPESDEERNLKEEINLMKVDLKEIEGKI
SDDSDQASVDAKNLAEKITQLESQLEQLTRELDDKIRFGQRPRSGAGRVTALPPSPAEEP
QATVVDRPHSRGGMEPHARPEERWGFQGSRERGSFDGSRSSDRPMTRQRW
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccctggggcggcgtcggcgcgtgggcgctggacgccgagcgcgccgaggag
gaggagcgcgagcaggccgcggccctcccggcccccgagccgcccgcgcccgccggcggc
gccgccagcttccccagcctccgcgaggcggccgccgcgaccggcggcggcaagtccaag
aagaagaacaagggcaccacgctctcgctctccgagttcaccacctacggcgccgcggcg
gcccaccgcagggccgcccccgtcgagccccgggggctcaccccggaggagatgatgatg
ctgcccacggggccccgggagcgctccgccgaggagctcgaccgctcccgcgggttccgc
tcctacggcggcggcgggggcttcgggggaggggagcgccgcggcgggttcgacgacgag
ggccgccgtggcccgggcaggagctcggatctcgacatgccctcccgcgccgacgaggtc
gacgactggggggccggtaagaagttcaccccggcggccgccgactctggccgccgcgat
aggttcggcgggccctcccccctcggccgcgcggatgacattgacgactggtcgcgcgac
aagaagccgctcccgtcgcgctaccccagcctcggttcgggtggtggcggtggattccgc
agctcgccgggtttccgcgactcaccgggcttccgtgactcagcggcttcctcagattcc
gaccgttgggtccgtggagccacccctctgccacacaacggcgaggggatgggggagagg
ccgcgcatcgttctcaatgctccgaaacgtgatccttcggctaccactacgccacctgct
gaggtggcacgcaaccggccaagcccatttggggctgcaaggcccagggaggatgtgctg
gccgagaagggggtggattggaggaagatcgagagtgagattgagcagaagaccagccgg
cctaccagctcgcactccagcaggccaaatagcgcgcattcctcccgccctgggagccct
ggttcgcaggtttcagcagttggaagtgagggagcacccagggcacggccaaaggttaac
ccattcggcgatgccaagccaagggaactggttctgcaggagaaagggaaagattggagg
aagattgaccttgagctggagcatcgtgctgtaaataggccagagtcagatgaagaaaga
aatttgaaagaggaaatcaaccttatgaaggtggatctgaaagaaattgagggaaagata
agtgatgattctgaccaagcctcagtagatgcaaaaaatttggctgagaagataacccag
ttggaaagtcaacttgagcagcttacaagggagttggatgacaagattcgatttgggcaa
agaccgcgttctggtgcaggcagggttacagcacttccacctagtccagcagaggaacca
caagctacagttgtggacagaccgcattctcgtggtggtatggaaccacatgcaaggcca
gaagaaagatggggatttcaaggaagcagagaaaggggatcttttgatggaagcagaagt
tcagataggccaatgaccaggcagaggtggtga
DBGET
integrated database retrieval system
