Setaria viridis (green foxtail): 117863422
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Entry
117863422 CDS
T07951
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00500
Starch and sucrose metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117863422
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117863422
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
117863422
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Storage polysaccharide
117863422
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
117863422
NCBI-ProteinID:
XP_034603008
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All DBs
Position
7:complement(29624382..29632025)
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AA seq
1153 aa
AA seq
DB search
MEMALRAQSPLCSRGRPLLVVRPAAVLAQSTVGRSRFTGGRLVRCMVSSSDYSKRNPRRT
STPKPKGTASRGGYASRPTAESSTKKIEESSTDEGDLGKSNGTLHIEATEQAGTAAKDEV
QATEEADQNQSSASSSTTLDDESIDRKLDEYRGKISALVSSKSEPSSLASVRGQDKPVVG
VHEQEGSTTEEHDSSIVDEPPKGRPFAEAVVGYPVKDAAEDQEQYEPEMQAPVEDDVDPE
VLKRRLQELADENYSVGNKCFVFPEVVKADSMIYLYLNRSMSTLASEPDVLIKGAFNGWR
WNSFTEKLHKSELRGDWWCCELYIPKQAYRLDFVFFNGDTVYENNNHNDFFLEIESDIDE
HSFEDFLAEEKRKELERLAAEEAERKRQAEEERRREEERAAMEADRAQAKSEVEMKKEKL
HQMLSLASRYSDNLWYIEPNTYRGGDRVRLYYNRSSRPLMHNNEIWMHGGYNNWIDGLSI
AERLVKSHEKDGDWWYAEVTLPEKALVLDWVFADGPPGNARNYDNNERQDFHAIVPNNIP
EDMFWVEEEHRIFRRLQQERREKEDADRLKAEISAKMKAEMKEKTMRAFLLSQKHIVYTE
PLEVRAGTTVDVLYNPSNTVLNGKPEVWFRGSFNRWTHPSGPLPPQKMVKAENGSHLQAT
VRVPLDAYMLDFVFSESEDGGIYDNRNGMDYHIPVLDSVAKEPPMHIVHIAVEMAPIAKV
GGLGDVVTSLSRAVQDLGHKVEVILPKYDCLNLSNVKDLHYQQSFAWGGTEIKVWFGKVE
DLPVYFLEPQNGMFWVGCVYGKNDESRFGFFCHSALEFLLERGSSPDIIHCHDWSSAPVA
WLYKEQYALNGLGNGRVVFTIHNLEFGAHHIGKAMAHCDKATTVSDTYSKEVAGHGAIAP
HYFKFHGIRNGIDPDIWDPYTDSFIPVHYTSENVAEGKSAAKKALQQKLGLQQTDTPIVG
IISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDPRIQGDFTNLASQLHGEYHGRVKL
CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSIPIVRKTGGLYDTVFDVDND
KDRAQAQGLEPNGFSFEGADSSGVDYALDRAITTFYDARDWFNSLCKRVMEQDWSWNRPA
LDYMELYHSARKN
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggagatggcactccgggcgcagagcccgctctgctcccggggccgcccgctgctcgtc
gtccggccggccgctgtcctcgcgcagtctaccgtagggcgcagcagatttacaggaggc
aggcttgttcgatgcatggtatcaagttcagattattccaagaggaatccgaggagaaca
tcgactcctaaacccaaaggcactgcctccagaggagggtatgcctcaagacctactgct
gagtccagcacgaagaagattgaggaaagcagcactgatgaaggtgatcttggcaaaagc
aatgggacactccatattgaagcaacagagcaggcaggtaccgcagcaaaggatgaggtt
caggccacagaagaggctgaccaaaatcaatcttcagcatcgtcttccacaaccctggat
gatgaatcaattgacagaaaacttgatgaatatcggggtaaaataagtgcactagtaagt
tcgaaatcagaaccttcatcacttgcaagtgttcgtggacaagacaaaccagttgttggt
gtccatgaacaagagggatcaacaactgaggaacatgacagttcaattgttgatgaaccg
ccaaaaggcaggccatttgccgaggcagttgtaggctatccagtgaaagatgcagcggag
gatcaggaacagtatgaaccagagatgcaagcaccagtagaagatgatgtggacccagaa
gtgctaaagaggaggcttcaagagcttgctgatgaaaattattcagtcggaaacaagtgt
tttgtttttcctgaagtggtgaaggctgattcaatgatttatctttacttaaaccgcagt
atgtcaaccttagctagtgagcctgatgttcttataaaaggtgcattcaatggttggaga
tggaactcgttcactgaaaaattgcataaaagtgaattaagaggggattggtggtgttgc
gaactctacattcccaagcaggcatacagattagactttgtattctttaatggtgacact
gtctatgaaaacaacaatcacaatgattttttcctggaaatagaaagtgacatagatgaa
cactcatttgaggatttcttggctgaagaaaagcgaaaggaacttgagaggcttgctgca
gaagaagctgaaaggaaaagacaggctgaggaggagcgcaggagagaggaagaaagggcc
gcaatggaggcggacagggcacaagcaaagtccgaggttgagatgaagaaggagaaattg
caccagatgttgagtttggccagcagatattctgataacttatggtacatagaacctaac
acttatagaggaggggacagggttagattatactataatagaagctcgagaccactaatg
cataacaatgagatttggatgcatggaggttacaacaactggattgatggtctctctatt
gctgaaagacttgtcaaatctcatgaaaaggatggtgattggtggtatgcagaagttacg
ttacctgaaaaggcattggtgttggactgggtttttgctgatgggccacctggcaatgca
aggaattatgataacaatgaacgccaggatttccatgctattgttccaaataacatacca
gaggacatgttttgggtggaagaagaacataggatctttagaaggcttcagcaagagaga
agagaaaaggaggatgccgatcgactgaaggctgagatatctgcaaaaatgaaggctgag
atgaaggaaaagactatgagagcatttctgctctcacagaaacatatcgtgtatactgag
ccacttgaagtacgtgcaggaaccactgtggatgtgctttataatccttcgaacacagtg
ctgaatggaaagccagaggtttggttccgaggttcctttaaccgttggactcatccaagt
ggtcccttaccaccacagaagatggtgaaggcagagaatggttcacacttacaagcaaca
gtcagggttcccttggatgcatatatgttggactttgttttctctgagtcggaagatggt
gggatatatgacaataggaatgggatggactatcatattcctgtgttggattcggttgca
aaggaacctcctatgcatattgtgcacattgcagtggaaatggcccctattgcaaaggtt
ggaggtcttggcgatgttgttaccagcctttcacgagctgttcaagatttaggccacaag
gttgaggtgattctgccaaagtatgattgtttaaacctaagcaatgtgaaggatttacat
taccaacaaagttttgcttggggtggcacagagataaaagtatggtttgggaaggttgaa
gacctccctgtttacttcttggaaccacaaaatgggatgttttgggtgggatgtgtctat
gggaagaatgatgagagtagatttggcttcttctgccattctgcactggagtttctcctc
gaaaggggatcttctcctgatatcatacattgtcatgattggtcaagtgctccagttgct
tggctatacaaggaacagtatgctcttaatgggctgggaaatggtcgggttgtatttacc
atccacaatcttgagtttggagcacatcacattggcaaggcaatggcgcattgtgacaaa
gctacaactgtttccgatacatattcgaaggaagtggctggacatggagcaattgctcct
cactacttcaaattccatggaattcgaaatgggattgatcctgatatttgggatccatat
accgacagctttattccggtccattatacatcagagaatgttgccgagggcaagagtgct
gcaaaaaaggcattgcagcagaagcttggattacagcaaactgatacccctattgttgga
atcatcagtcgtctaacagtccagaagggaattcaccttatcaagcatgcaatttatcga
actcttgaacgcaatggacaggtggttctgctgggttcagcaccagatcctcgcatacaa
ggtgacttcacaaacttagcaagtcaactgcatggtgaatatcatggccgggtgaagctt
tgtttaacttatgatgagccactgtcccatttgatatatgctggtgcggacttcattctt
gttccttccatcttcgaaccttgtggtttaacacagctcattgctatgcggtatggatcc
atcccgattgttcggaagactggaggcctttatgacaccgtctttgatgttgacaatgat
aaggatcgggctcaggcacaaggcctcgagccaaatggattcagtttcgaaggagctgat
agcagtggtgtggattatgctcttgacagagcgataaccacattttatgatgctcgtgac
tggttcaactccctttgcaagagggtaatggagcaggactggtcatggaacaggcctgct
ctggactacatggaactgtaccattctgctcgcaaaaactga
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