Setaria viridis (green foxtail): 117863516
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Entry
117863516 CDS
T07951
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117863516
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117863516
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117863516
03029 Mitochondrial biogenesis [BR:
svs03029
]
117863516
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
117863516
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class I (G)
117863516
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117863516
Prokaryotic type
Other AARSs
117863516
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117863516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Motif
Other DBs
NCBI-GeneID:
117863516
NCBI-ProteinID:
XP_034603165
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All DBs
Position
7:31436730..31443072
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AA seq
656 aa
AA seq
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MRALAAAATAVAAPTPARLRLRLPLAPRPPRSGHCRAASSSRLLRLPCSATTMGDETSTS
VPAQGQEPAVGAGSVKQQLSRLVISSLRATVPEVEVEPMVEVSAKFADYQCNNAMGLWSK
IKGSGTSFKNPNAIGQAIAKNLPSSDIIESTSVAGPGFVNITLSNSWVAKRIQDMLVNGI
NTWAPILPVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVDVLRRNHVGDWG
TQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKASKNRFDNDPEFKERAQQGVVRLQGGE
EKYREAWKKICDISRSEFDLVYKRLNVELEEKGESFYNPYIPKVLAELSSKGLIQESEGA
QVIFIEGYQIPLIVVKRDGGFNYASTDLSALWYRLNVEKAEWIIYVTDVGQQQHFEMFFK
AARMAGWLPDPNEKKFPKTSHVGFGLVLGSDGKRFRTRSTEVVRLVELLDEAKSRSKSEL
LQRLTENGKIVDWTDEELEQTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVY
LQYAHARICSIIRKSNKDVEELKMSGAICLDHPDERVLGLYLIRFAEVVEEACTNLLPNV
VCEYLYNLSEMFTKFYTNCQVVGSPEETSRLLLCQATAVVMRQCFQLLGITPVYKL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctctcgcggcagcagcaactgcagtggcggcgcctacccccgcgcgcctccgt
ctccgcctcccgctcgccccccgccccccgcgctccggtcactgtagagcagcttcttcc
tccaggcttctgcggttaccctgcagcgccaccaccatgggagatgagacatcgacatcg
gttcccgcccaggggcaggaacctgctgttggtgctgggagtgtcaagcaacagctttcc
aggctggtcatttcgtccctccgggctacggtccctgaagtggaggtagaaccaatggtt
gaagtttcagcaaagtttgctgactaccagtgcaacaatgctatgggattatggtcaaag
attaaaggatctggaacaagtttcaaaaaccctaatgctattggacaggccattgcaaag
aacttgccttcctctgacattattgagtccacatctgttgctggacctggttttgtgaat
attaccttatcaaacagctgggttgcaaagagaatacaagacatgcttgtcaatggtatc
aatacttgggcacctattctaccagtaaagagggcagtgattgatttttcatcacctaat
atcgcaaaagaaatgcatgttgggcatttaaggtctacaattattggagatacattagca
cgcatgtttgagttctcaaatgttgatgttctgcggcgaaaccatgtgggagattggggt
acacagtttgggatgctcatagagtatctgtttgaaaaattcccaaattggcaggaaata
ggtagccaggccattggtgacctccagattttctataaagcatccaagaataggtttgac
aatgatcctgagtttaaagagagggctcaacaaggagttgttcggctacagggaggggag
gagaaatatcgagaagcatggaaaaagatttgtgacatcagcaggagcgaatttgacttg
gtgtacaagcgcctaaatgtggagcttgaagaaaagggggagagtttctataatccttat
atacccaaagtgctggcggaattgagtagcaaaggattgatccaggagagtgagggtgct
caagtaatatttattgaaggttatcagatccctttgattgtggttaaaagggatggtggg
ttcaactatgcctcaacagatttatctgctctttggtatcggctcaatgttgagaaggca
gaatggataatatatgtaacagatgttggccagcagcagcactttgaaatgtttttcaaa
gctgcaaggatggctggttggctcccagatccaaatgaaaagaagtttccaaaaacgagt
catgttggatttggtctcgttcttgggtcagacggcaagcgcttccgcactcgtagtact
gaggttgttcgattggtagagctgcttgatgaggctaaatctcggagtaaatcagaacta
ctacagcggcttaccgaaaatggtaaaattgttgactggactgatgaggaattagaacaa
acttcagaggcagttggatatggcgccgtgaagtatgctgatctgaagaacaatcggctt
accaattacacatttagttttgaacagatgctaagcgataagggaaatactgctgtgtac
cttcagtatgctcatgctcgcatttgttccattattcggaaatccaacaaggatgtggaa
gagctgaaaatgagtggagccatttgtcttgaccatccagatgagcgtgtcttggggctg
tatctgatccgatttgcagaggttgttgaagaggcttgcacaaatctccttccaaatgtt
gtttgtgaatacttgtacaatctatccgaaatgttcacaaaattctataccaactgtcag
gtggtcgggtcaccggaggagacaagccggctgctgctttgccaagcgactgccgttgtc
atgcgtcagtgcttccagctgctcggaattacaccggtctacaagctgtga
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