Setaria viridis (green foxtail): 117863551
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Entry
117863551 CDS
T07951
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117863551
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117863551
04121 Ubiquitin system [BR:
svs04121
]
117863551
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117863551
Peptidases and inhibitors [BR:
svs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117863551
Membrane trafficking [BR:
svs04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117863551
Ubiquitin system [BR:
svs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117863551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
117863551
NCBI-ProteinID:
XP_034603218
LinkDB
All DBs
Position
7:19243545..19249078
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AA seq
515 aa
AA seq
DB search
MGKFMHDSPLVSHSEVNRRHYNLAAVAVGLGLGVAGLCKALHSGLSIPWVSPRNLFLGSG
RVYYVGGLRNLGNNCFLNVILQALASCDSFVSFLDNLLATDGLLPEEKVERMPLLLALSS
LLEDLSIVRDERIVLNPQGVMHALSFYVSHFNLTRQQDASEAFLHLLISLRDEFSHCYVP
HRSSLADITLSHSKVYRQREGNEPECKRWKQNLFGPFDGTIGSILSCRNCSSVLSLDFQN
FQCLPLSPVLNTDGDVTNGCSLVDCLKYFTVVEHLDNYRCDRCWHITAAKYLSLKSEADE
EKVTKLNTCVDSGTCSCRGMFPPEEIPCSSSSRATKQLIISQCPKILCIHLLRASVRFDG
EPIKHKGHISFPLLLNLSPFAGGASSTGLGPGPLAVNMQRDGQQALHLYRQLNMQISLNA
NVDVASSSSSSPQQSPSSRSKLYGLSAVVEHYGKCGGGHYAVYRRVASNPDHDDPGQPLA
GLAKRWFYISDGHVSEVSEDDVLAAEATLLFYERL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtttatgcatgacagtccactggtatctcatagtgaagtaaacaggcgtcac
tacaatcttgcagccgttgctgttggcttgggactaggagttgctggcttgtgcaaggca
ttgcatagtggtttgtccataccatgggtttctccgaggaatttatttttgggatcaggg
agagtatactatgttggaggtctacgaaatcttggcaacaattgctttcttaatgtcatc
ctgcaggcacttgccagctgtgatagttttgtttcctttctagataatttgcttgcaact
gatggcttactacctgaagaaaaggtcgaaagaatgcctcttcttcttgctctaagttct
ctcttggaagacttgagcatagttcgagatgaaagaattgtgttgaatccacaaggagta
atgcatgctttgagtttctatgttagtcacttcaatttgaccagacagcaggatgcttcg
gaagcttttcttcatcttttgatctcactgcgggatgaattttcccattgttatgtacca
cataggagttctctggcagacatcactctgtctcactctaaagtatataggcaaagggaa
ggtaacgagcctgaatgcaagcgctggaaacaaaatctgtttggcccctttgatgggaca
attggcagcatattgtcatgcagaaactgttcatctgtgctatcgttggacttccagaat
ttccaatgcctgcctctctcaccagtgcttaatacagatggagatgttaccaatgggtgt
agtttggtggattgcctaaagtacttcactgtggtggagcatcttgacaattatcgctgt
gatcggtgttggcatattactgctgccaagtatctatctcttaaatcagaagctgatgag
gaaaaagttaccaaacttaacacctgtgtcgactctggcacttgcagttgcaggggtatg
ttccccccagaggaaataccatgttcatcatcttcacgagcaacaaagcagttgattatc
agtcaatgtccgaagattttgtgcattcatttactacgtgcttcagtcagatttgatggt
gagcccatcaaacataagggacatatttcttttcctttacttctcaatctatccccattt
gcgggaggtgcatcaagcactgggctggggcctggacctttggcagtgaacatgcaaaga
gatggccagcaagccctccatctatatcgacaactgaatatgcagataagcctaaatgca
aatgttgatgtggccagtagttcatcatcatcaccacagcagtcaccatcatcaaggagc
aagttatatggtctttcagctgtcgtggagcactacgggaaatgtggaggagggcactat
gccgtttacaggagagtcgcatcaaatcctgatcatgatgatccagggcaacctcttgca
ggtctagccaagcggtggttttacatttcagatggtcatgtatcagaagtttcagaggat
gatgttttggctgcggaggccaccctccttttctatgaaagattgtag
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