KEGG   Setaria viridis (green foxtail): 117863554
Entry
117863554         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:svs03041]
    117863554
Spliceosome [BR:svs03041]
 Complex C
  Other components
   Complex C specific factors
    117863554
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WD40_like NBCH_WD40 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 PEP5_VPS11_N Beta-prop_RIG_1st Mala_s_1-like Beta-prop_Nup120_160 Beta-prop_NOL10_N VID27 PQQ_2 PPPI_inhib
Other DBs
NCBI-GeneID: 117863554
NCBI-ProteinID: XP_034603230
LinkDB
Position
1:26660504..26664318
AA seq 303 aa
MSSSGTAAQHLPRTEARSLSGHEGAVLAVRFNRDGNYCLSCGKDRTLRLWNPHTGAHVKT
YKSHAREVRDVHSSSDNAKLVSCGADRQIFYWDVASGRVIRKFRGHNSEVNSVKFNEYNA
VVVSAGYDRTVRAFDCRSQSSDPIQTIDTFQDSVMSVNLTKTEIIAGSVDGTVRTFDIRM
GRETVDNLGHPVNCITLSNDGNCLLANCLDSTVRLLDKSSGELLQEYKGHACKSFKMDCC
LTNDDAFVVGGSEDGYVFFWDLVDAPVVARFRAHSSVVTSISYHPTKACMLTSSVDGSIR
VWT
NT seq 912 nt   +upstreamnt  +downstreamnt
atgtcgtcctcggggacagcggcgcagcatctgccgcggacggaggcgcggtcactatct
gggcacgagggggcggtgctcgcggtgcggttcaaccgcgacggcaactactgcctgagc
tgcggcaaggaccgcaccctccgcctctggaatccgcacaccggcgcccacgtcaagacc
tacaagtcccacgcccgcgaggtccgcgacgtccattcctcctcggataatgcgaagctg
gtgtcgtgcggcgccgacaggcagattttctactgggacgtcgcctcgggtcgcgtcatc
cgcaagttccgcggtcacaacagcgaggtcaattcagtgaagttcaatgagtacaatgct
gttgtagtctcagctggttatgaccgtacggtgcgtgcatttgactgcaggtcacaaagc
agtgatccgattcagactattgatacttttcaagacagtgtaatgtcagttaacctaaca
aagacagaaataattgctggcagtgttgatggtactgttcggacatttgacattcgcatg
ggtagggagactgttgataatctggggcatcctgtgaactgtataactttatcaaatgac
ggcaattgccttttagctaactgtttagattctactgtgaggcttctagacaagtcatcg
ggagaactgttacaggagtacaaggggcatgcatgcaagtccttcaagatggattgctgc
ctgacgaatgatgatgcattcgttgttggtggatctgaggatggttatgttttcttctgg
gatttggtggatgcgcctgttgtagcaagattcagggcacatagttctgtggtaaccagc
atcagttaccacccaacgaaggcgtgcatgttgacatcttctgtggatggctctattcgt
gtttggacctga

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