Setaria viridis (green foxtail): 117863805
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Entry
117863805 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K03267
peptide chain release factor subunit 3
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117863805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117863805
03012 Translation factors [BR:
svs03012
]
117863805
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117863805
Translation factors [BR:
svs03012
]
Eukaryotic type
Release factors
117863805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117863805
NCBI-ProteinID:
XP_034603550
LinkDB
All DBs
Position
7:6098644..6109526
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AA seq
536 aa
AA seq
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MEHDAHTEAPPHAVPPPEDATVDDWAREDAEPMDSGAAPTDVAAADSAADGPPAPASEAE
GVKDIQSSLQSLELKANVAAQEDAQDVEDEVEETKRHLNVVFIGHVDAGKSTSGGQILFL
SGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEHTRFTIL
DAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLVV
VINKMDDPTVKWSKERYDEIEAKMVPFLKSSGYNVKKDVQFLPISGLLGSNMKDRMDKST
CSWWDGPCLFEVLDRIEVPLRDPKGPVRMPIIDKYKDMGTVVMGKMESGTIREGDSLLVM
PNKSHVKVIGISLDESKVRRAGPAENVRVKLSGIEEEDIMAGFVLSSVGNPVGAVTEFNA
QLQILELLDNAIFTAGYKAVLHVHSVVEECEIVELIEEIDMKKKKEADPKKKKPKRKPLF
VKNGAVVVCRIQVNNLICVEKFSDFPQLGRFTLRTEGKTVAVGKVVEVPPAGSPTF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgacgcgcacaccgaggccccgccgcacgccgtcccgccgcccgaggacgcc
accgtcgacgactgggcgcgcgaagatgcggagcccatggactccggcgccgccccaacg
gacgttgccgcggcggattccgccgctgatggccctcccgcgcccgcttccgaggctgaa
ggtgtcaaggatattcagtcatctcttcagtcattggagcttaaggcaaacgttgctgca
caagaagatgctcaggatgtcgaagatgaggtagaggaaacaaaacgacacttgaatgtg
gttttcattggccatgttgatgctgggaaatcaacttctggaggacagatattgtttttg
agtggtcaagttgatgataggaccatccagaaatatgagaaggaagcaaaggataaaagc
cgagaaagctggtacatggcttacattatggacacaaatgaggaagaacgggttaaggga
aagactgttgaagttggcagagctcactttgagacggaacacacaagattcactatttta
gatgcaccgggtcacaaaagttatgttccaaatatgataagtggtgcttctcaagctgac
attggtgttctggtcatatctgctcgaaaaggtgaattcgaaactggttatgaaaaagga
ggacagacccgtgaacatgtactacttgcaaaaactttaggtgttgctaagctggtagtt
gtaataaataagatggatgacccaactgttaaatggtctaaggaaaggtatgatgagatt
gaggcaaaaatggttcctttcctcaaatcttcagggtacaatgttaaaaaagatgtccag
ttcttaccaatatctggtcttttgggaagcaatatgaaggacaggatggataaaagcact
tgtagttggtgggatggcccatgtctttttgaagttctggatcgcattgaagttccttta
cgtgaccccaaaggtccagtaagaatgccaataattgataaatataaagatatgggcact
gttgtaatgggaaagatggagtcaggcacgatcagagagggtgacagtttgttggttatg
ccaaacaagtcccatgtaaaagtcattggtataagcctggatgagagcaaagtgcgtcgt
gctggaccggccgagaatgttcgtgtcaagttgtcaggaattgaagaggaggatataatg
gctggttttgtactttcaagtgttggtaatccggttggtgctgttactgaattcaacgct
cagttgcagattctagagttgcttgacaatgctatttttactgctggctacaaagctgtg
ttgcatgtccactctgttgttgaggagtgtgagatcgttgagctcatagaggaaatcgac
atgaagaaaaagaaagaagcagatcccaagaagaagaagccaaagaggaagcctcttttt
gtgaagaatggtgctgttgttgtttgccgtattcaggtaaataacttgatatgcgtagag
aagttctctgatttccctcagcttggaaggtttacacttcgaactgaaggaaagacagta
gctgtagggaaagttgttgaagttcctcctgctggcagcccaacattctga
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