Setaria viridis (green foxtail): 117863806
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Entry
117863806 CDS
T07951
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117863806
Transcription factors [BR:
svs03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117863806
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Paralog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
117863806
NCBI-ProteinID:
XP_034603551
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Position
7:26562593..26569375
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AA seq
607 aa
AA seq
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MASNSSAAAAAAFFGIRDGDQQDQIKPLISPQQQQLAAALPGVAGAAPAPATGQGAPAAA
AQPPPKKKRTLPDPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKL
KQKNPLQAQRRRVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAV
QSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPPTSLSSLTGHLY
GATNAGNMALSLSQVGSNLTSTLQDGGHHHHHHHHHPSPELLRLAATAGGGGSSIAARLD
HLLSPASGASAFRPPPQAPPSSAAFFLNAAAAAAGQDFGDDGGNGPHSFMQTKPFHGLMQ
LPDLQGNGAGGPGGSAPGLFNLGFFANNGNSSGSSHEHASQGLMNNDQFSGGAGGGGGSE
ASAAGIFGGNFVGGGDHVPTPGLYGDQSTMLPQMSATALLQKAAQMGATSSANGAASMFR
GFVGSSPHGRPATPHMEQSEANLNDLMNSLAGGGVGAAGIFGGSNGGGGGGGGAGMFDPR
QLCDMEHHEVKFGQGGGDMTRDFLGVGGGGIVRGISTPRGDHQSSSDMSSLEAEMKSASS
FNGGRMP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaattcatcggctgcggcggcggcggcgttcttcgggattagggacggggac
cagcaagaccagattaagccgctgatatcaccgcagcagcagcagttggcagcggcgctg
cccggcgtggcaggtgccgcgcccgctccggcgaccggccaaggcgcgccggcggcggcg
gcgcagccaccgcccaagaagaagagaactttgccagaccccgacgctgaggtgatcgcg
ctgtctcccaagacgctgctggcgacgaaccggttcgtgtgcgaggtgtgcaacaagggg
ttccagcgggagcagaacctgcagctccaccgccgcgggcacaacctgccgtggaagctg
aagcagaagaacccgctgcaggcgcagcgccgccgcgtgtacctgtgcccggagccgacg
tgcgtccaccacgacccgtcccgcgccctcggcgacctgacgggcatcaagaagcacttc
tgccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagcgctacgccgtg
cagtcggactggaaggcgcactccaagatctgcggcacccgcgagtaccgctgcgactgc
ggcaccctcttctcccggagggacagcttcatcacccacagggcgttctgcgacgcgctc
gcgcaggagagcgcgcggctgccgccgacgagcctcagcagcctaaccggccacctctac
ggcgccacgaacgcgggcaacatggcgctcagcctctcgcaggtgggctccaacctcacc
tccacgctccaggacggcggccaccaccaccaccaccaccaccaccacccgtcaccggag
ctcctccgcctcgccgccacggccggcggcggcggcagcagcatcgccgcgcgcctcgac
cacctcctgtcgcccgcctccggcgcgtccgccttccgcccgccgccgcaggctccgccc
tcgtcggcggcgttcttcctcaacgcggctgcggcggcggcggggcaggacttcggcgac
gacgggggcaacgggccccactccttcatgcagaccaagccgttccatggactcatgcag
ctgcccgacctccaaggcaatggcgccgggggccccggcggttcggcgccaggcctcttc
aacctgggcttctttgctaacaatggcaacagctcggggtctagccacgagcatgcaagc
cagggcctcatgaacaatgaccagttcagcggcggggcaggcggcggcggtggttcggag
gcatcggcagcggggattttcggcgggaactttgttggcggtggagaccatgttccaacg
ccggggctctacggcgatcagtccaccatgctgccgcagatgtcggcgaccgctctgctc
cagaaggcggcgcagatgggcgccacctcgagcgccaacggcgcggcgtccatgttccga
ggcttcgtcgggtcttcccctcacggccggccggcgacgccgcacatggagcagagcgag
gcgaacctgaacgacctgatgaactcgctcgctggaggcggcgtcggcgccgcgggaatt
ttcggaggcagcaacggcggcggcggcggcggcggcggcgcggggatgtttgatccgagg
cagctgtgcgacatggagcatcacgaggtgaagttcggccagggcggcggcgacatgacg
cgggacttcctcggcgtgggcggaggcggcatcgtgcgcgggatatcgacgcccaggggg
gaccaccagagcagcagcgacatgagctcactggaggccgagatgaagtcggcctcgtcc
ttcaacggcggcaggatgccatga
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