Setaria viridis (green foxtail): 117863868
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Entry
117863868 CDS
T07951
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117863868
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117863868
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117863868
Peptidases and inhibitors [BR:
svs01002
]
Cysteine peptidases
Family C85
117863868
Ubiquitin system [BR:
svs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
117863868
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA
UBA_9
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117863868
NCBI-ProteinID:
XP_034603640
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All DBs
Position
7:18693126..18697544
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AA seq
541 aa
AA seq
DB search
MTRIFVQRGAAGSSSSSSRSGSQPAQPQPPAAAREEELPLRPQPQLPELLATDDITEHLN
EGSENSSSSNKPSRLDDPISESSSSAEERAAREKPPKDDSNLINPTFLVEELKGLQISDQ
IEHGNSVPSSTGSSQMAGAASHPPPPPAPPPKPSPGNIGLRRMGSGSSNSMRIGSSRRPV
AWPPVAARTSASGSRPSSPRSLVDGEGYNSADEQGPCYGSSYDDSERDLMFEHDLRRVKG
LEIRKMAEDGNCLFRAVADQVYGDAEAYDMARQMCVDYMERERDHFSEFITESFTLYCKR
KRRDKVYGNNVEIQAFAEMYNRPIHIYSYSTEPINIFQGSYNTDVPPIRLSYHHGNHYNS
VVDPRRQTVGAGLGFSSLRGTNNVDRDQVKAAIKAQQDQQIENALLAEGRFYSDLELTER
EIERMVMEASRAEYLAEEKKLNIRESSTSGAEPSSSAAISGSSRSAAAVDRGSEECFVLP
DTVLTRSMQLLLAMGFSYIQVMEAYSIFGEDVDSMICYLVETGGPGASEGGSNRRKGKAA
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggatcttcgtgcagcgcggggccgccggctcctcgtccagctccagccgctcg
ggatcgcagccagcgcagccgcagccgccagcagctgcccgggaggaggagctgccgctg
cggcctcagccgcaactgccggagctattggccactgatgatataaccgagcatctaaat
gagggcagcgagaacagtagcagcagcaataagccttcaaggctggatgaccccatttca
gagagctcgagctcggcggaggagagggctgcaagagagaaacctcctaaggatgactct
aatctaatcaaccccactttcttggtggaggaactgaaaggactccagatttctgatcag
attgaacatgggaattctgtgccgtctagcactggttcgtcacagatggcaggtgcagca
tcgcacccgccaccaccaccagctccacctccaaaaccatctccagggaatattgggttg
cggagaatggggtctggaagttcaaacagtatgcggattggatcttcaagaaggccagta
gcttggccaccggtggcagcccggacatctgcttcaggttctcggccttcttcgcctagg
tcactggttgatggtgaaggttataatagtgcagatgaacagggtccctgttacggctcg
agttatgatgattcggaaagggacctcatgtttgagcatgacctaaggcgagtgaaagga
ttggaaatcagaaagatggcagaagatggtaactgtctgttcagagcagttgctgatcaa
gtttatggagatgcagaagcttatgatatggctaggcagatgtgtgttgattacatggaa
agggaacgggatcatttctctgagttcataactgaaagttttacattatactgtaagagg
aaaaggagagataaggtatatggcaacaatgttgagatccaggcatttgcagagatgtac
aatcgtcccattcacatatattcatacagtacagagcccattaacatttttcaaggaagc
tataacacagatgttcctccgattaggttaagttatcatcatggtaatcattacaattca
gtggttgatccccgtcgacagacagttggggcaggccttggatttagctcccttagaggg
accaataatgttgacagggaccaggtgaaggctgcaataaaagctcagcaagatcagcaa
atcgagaatgcacttttggctgaagggagattctactctgatttggagttgacagaaagg
gaaatagaacggatggtgatggaggcctcaagggcagagtatctggcggaggagaaaaag
cttaacatcagggagtcatcaacatcaggggcagagccatcatcttctgccgcaattagc
gggtcttctcgttccgctgcggcagtagacagagggagtgaggagtgcttcgtgctccca
gacaccgtgctgactcgcagcatgcagctgctcctggcgatggggttcagctacatccag
gtcatggaggcctacagcatattcggcgaggacgtggactcgatgatctgctacctggtg
gagaccggaggccctggagcctcagaaggcggtagcaaccgccggaaaggcaaggctgct
gagtga
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