Setaria viridis (green foxtail): 117863913
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Entry
117863913 CDS
T07951
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117863913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117863913
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117863913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
117863913
NCBI-ProteinID:
XP_034603708
LinkDB
All DBs
Position
7:complement(19811499..19821715)
Genome browser
AA seq
1498 aa
AA seq
DB search
MLLVDSIVGGKPLSCTAALCRGAPTMAWGEDEAIGPDVASAGLHVSERIGRDAAAQPDLE
EALEASRYSSHPYSSHPKEWPPLVEIAETRQLPPMLIERYNAAAGEGTALCGIFSDIHRA
WATVDNSFFIWRFDKWDGQCQDYNVDEQAICAVGLARAKPGIFVEAIQYLLVLATPVELV
LVGVCCSASADGTDPYAELSLQPLPEYMIATDGVTVTCITCTDKGQIFLAGRDGHIYELQ
YTTGSGWRKRCRKVCLTTGIGSLLSRWVLPNAFKFSTVDPIVDMVIDDERNTIYARTEGM
KLQLFDLGANGDGPLTKVTEEKNIVDPRDAPYGGRRSNAQRSARSPKPSIVCISPLSSME
SKWLHAVAVLSDGKRLFLTTSGGSGSSVGLSSSLQRPTCLKIVATRPSPPLGVGGGLTFG
AVSAAGRAHPEDLALKVESAFYSAGALIMSDSSATAMSSLLAVQKDSAAQLSLPSTFGTA
SRSSRALRETVSALPVEGRMLCASDVLPLPDAAFTVQSLYADVECFTSFRKPSEKASIKL
WAKGDLPTQHILPRRRVVVFNTMGLMEVIFNRPVDILRKLFDGNTLRSQIEEFFNRFGAG
EAAAMCLMLAAKLLYAEDSLISNAVSEKAAEAFEDPGLVGMPQIDGTTALSNTRTQAGGF
SMGQVVQEAEPLFSGAYEGLCLCSSRLLYPIWELPIMVIRGPAGANEHEDGIVVCRLSAG
ALKILESKIRSLETFLRSRRNKRRGLYGYVAGLGDSGSILYKTGPIMGSGGRGNGRSPYN
SQIRDMNPTDQSASSKKPRLVYTSAELAAMEVRAMECLRRLLRRSGEALFLLQLICHHNV
VRLAQTLGNDLRKKLVQLTFHQLVCSEDGDQLAMRLISALMEYYIGPEGRGTVEEISTKL
REGCPSYFNESDYKYYLAVECLERASMTNNPDERDILARDAFNLLTKIPDSADLSAICKR
FENLRFYEAVVRLPLQKAQALDSNADVINGQIDPRHHDMITLQREQCYEIVMNALRTLKG
VGQGADKSSGLATAVDPASRSKYIKQIIQLSVQWPDTVFHEHLYRTLIELGLENELLEYG
GSDLVSFLQSAGRKHQEEVRAVSSLTSGAAKLQDLGAPISTSQTKYLELLARYYVLKGEH
IAAARMLLILAERQCSNSEEAPTLDKRYEYLRNAVLQAKSAGIAADSSRNPIDSSTVDLL
EGKLAVLRFQMQIKQELELMAARVENILSNSESPNDPFPRDNILADAEAAKAAKDKAKEL
SLGLKSITQLYNDYAVPFNLWEVCLEMLSFANYSGDADSKIVREIWARLLDQALTRGGVA
EACSVVKRVGSKLDPADGACLPLDIISLHLEKAALDRLSSGEELVGDDDVARALLGACKG
LPEPVLAVYDQLLSNGAIMPSLNIKLRLLRSVLAILREWGMSVIAHRLGTTSAGASFFFD
GTFSLNQTGTANQGARDKIISLANRYMTEVRRLNLPQNQTENVYRGFRELEEKLLSPY
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgctcctggttgatagtattgtgggaggtaagccgctctcctgcaccgccgcgttgtgc
cgcggcgctccgaccatggcatggggggaggacgaggccatcggccccgacgtggcctcg
gcggggcttcacgtctcggagcggatcggccgcgacgccgccgcacagcccgacctagaa
gaggccctcgaggcatcgcgctactcgtcccacccctactcctcgcaccccaaggagtgg
cctcctttggtggaaattgctgaaactcgtcagctccctcctatgttgattgaaagatac
aatgctgcagccggtgaaggaacagccctttgtgggatcttttctgacatacaccgggcc
tgggcaacggttgataattcatttttcatctggcgttttgacaaatgggatggacagtgt
caagattataatgtggatgagcaagcaatttgtgctgttggccttgctagggcaaagcct
gggattttcgttgaagccattcaataccttttagttttagcaactcctgttgagctggta
cttgttggagtttgctgttctgctagtgctgatggaacagatccgtatgctgagctttca
ttacaacctttacctgagtacatgattgccactgatggtgtcactgtgacatgcatcaca
tgtacggataagggccaaattttcctagctggacgtgatgggcatatatatgaattgcag
tatacaactggctcaggctggcgtaaacgctgccgtaaagtttgtcttactactggtatt
ggcagccttctttccaggtgggtcctgccaaatgcattcaaattctcaactgttgatcct
attgttgatatggtcatcgatgacgagaggaacactatctatgctcgcaccgaaggcatg
aaattgcagttatttgatttaggagctaatggcgatggccctttgacaaaagttacagaa
gaaaagaacattgttgatccacgggatgcaccttatggtggtcgaaggtctaacgcacaa
agatctgcacgatcaccaaaaccatcaattgtctgcatctcacctctatcgtctatggaa
tcgaaatggcttcatgctgttgctgttttgtcagatgggaagagattatttcttaccacg
tcaggtggaagtggttcttcagttggattgagcagtagtttgcagaggccaacctgttta
aaaattgttgctactaggccgtccccacccctgggggttggtggtgggcttacatttggt
gctgtttctgcggctggcagagctcatcctgaggatctagctttaaaagttgagtctgcg
ttctattctgctggtgctcttataatgtcagattcatctgctacagccatgtcatctctt
ctggctgtgcagaaagattcagctgcgcagttatcccttccgagtacgtttggaacagct
tctagaagctcccgagctctacgagaaacagtctctgctttgcctgttgagggtcgaatg
ctttgtgcctctgatgttctcccacttccagatgctgctttcacggtgcagtctttatat
gctgatgtggaatgcttcacaagtttcagaaaaccttctgagaaagcatctataaaactg
tgggcgaaaggagatcttcctacccagcatatcttacctcggaggagggttgttgtattc
aatacaatgggtttgatggaggtaatttttaacaggcctgttgatattctaagaaaattg
tttgatgggaacaccttgagatcgcaaattgaagaattctttaatcgctttggcgctgga
gaagctgcagcaatgtgcttaatgctagccgcgaagctactttatgctgaagatagtctg
ataagcaatgctgtttctgagaaagctgctgaggcatttgaggaccctggacttgttggg
atgcctcaaattgatggcaccactgctttatctaatacacgaactcaggctggaggcttt
agtatgggtcaagttgttcaagaagcagaacctttgttttccggtgcatatgaagggctc
tgtttgtgctcttcaagactactctatcccatatgggagcttcctattatggtgattcga
ggacctgctggtgctaatgaacacgaggatggcatagttgtttgcaggctgtcagctggg
gccttgaaaattcttgagagtaagattcgttcactggaaacatttttaagatctagaaga
aacaagagaagaggcctgtatggttatgttgctggcctgggcgattctggttcgatactc
tacaaaacagggcctattatgggttctggggggcgtggcaatggaaggagtccgtacaac
tcccaaattcgagatatgaaccccaccgatcaatctgcatcaagtaaaaagccaaggctg
gtttatacatcagcagaactagcggctatggaggtgagggcaatggaatgtcttaggcgg
ttgcttaggagatctggtgaagcactctttctgcttcaacttatctgccatcataatgtt
gtccgcttggctcagacactgggcaatgatttacgcaagaaattagttcaattaacgttt
catcaattggtatgttcagaggacggcgaccagcttgcgatgcggcttatttctgcactc
atggagtactatattggcccagagggcagaggaactgttgaggaaatcagtactaaattg
agggagggttgccctagttacttcaacgagtcagactacaaatattacttggcagtggaa
tgtcttgagagagcatctatgactaataaccctgatgaaagagatattcttgctagagat
gctttcaacctcttaactaagataccagactctgcagatttgagtgccatctgcaagaga
tttgagaacctaagattttatgaggctgtagtccggttgcctctgcagaaagctcaagca
cttgactccaatgctgatgttatcaatggtcaaattgatccaaggcatcatgatatgata
acgttgcagcgtgaacagtgctatgaaatagttatgaatgctctacgcaccctcaagggt
gttgggcaaggtgcagataagtcatctggtttagcaactgctgttgatccagcttctcga
agcaagtatatcaaacagatcatccaacttagcgtccaatggccggacacagttttccat
gagcatctatacaggacactgatcgagctcggtctagaaaatgagcttttggagtatggt
ggttctgatttggtttcttttctgcagagtgctggtcgtaagcatcaagaagaggttcgg
gcagtttcttcacttacatcaggagctgctaagttgcaagatttaggtgcacctatctcg
actagccaaacaaagtatcttgagctcctagcaaggtactatgttcttaagggggagcat
attgctgctgccaggatgttgttaatattggcagagagacaatgctccaattctgaagaa
gcacctacccttgacaagaggtacgaatatctcagaaatgcagtgcttcaggccaaaagc
gcaggcatcgctgctgattcatccagaaatcctattgatagtagcacagtggatttgctt
gaaggcaaacttgcagtgcttcgcttccaaatgcaaatcaaacaagaactggagctcatg
gcagcacgggttgaaaatattctgagcaattctgaatcaccaaatgatccgttccctcgt
gacaacattcttgctgatgcagaggctgctaaagctgccaaagataaggcaaaagagctt
tcattgggtctcaagagtatcactcaactatataatgactatgctgttccgtttaatctc
tgggaggtttgcctggaaatgctgagctttgctaattactccggagatgctgatagcaaa
attgttcgagaaatttgggccagactccttgaccaggcacttacaagagggggtgttgca
gaagcatgttctgtggtgaaaagagttggctcgaaacttgatcctgcagatggagcttgt
ttgcctttggatataatatcccttcatcttgagaaggctgcattggatagattaagttca
ggagaagaattagttggcgatgatgatgttgcaagagctcttcttggtgcctgtaaaggt
cttcctgaaccagtgcttgctgtgtatgatcagctgttatcaaatggggcaatcatgcct
tcacttaatataaagttgcgccttttgagatcagttcttgcgatccttcgtgagtggggg
atgtctgtcattgcacatagactaggcaccacaagtgctggggcttcattcttttttgat
ggaacattttcgctgaatcaaacaggaactgcaaatcaaggtgctcgagataaaataatt
agtttggcgaacaggtatatgactgaagtgaggcgattaaaccttccacagaaccaaacg
gagaatgtctaccgtggtttccgtgagcttgaggagaaattactctcaccttattag
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