KEGG   Setaria viridis (green foxtail): 117863959
Entry
117863959         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K15361  WD repeat-containing protein 48
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117863959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svs03400]
    117863959
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     117863959
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 RAWUL Beta-prop_DCAF12 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 117863959
NCBI-ProteinID: XP_034603786
LinkDB
Position
7:33117211..33125764
AA seq 754 aa
MHRVGSAGNTAGSTRPRKEKRFTYVLNDADAKKHCAGINCLAYLNGSANSTSDYLFSGSR
DGTLKRWELNNGDASFSATFESHVDWVNDAIIVGEKLVSCSSDTTLKVWNCFSDGACTRT
LRQHSDYVICLAAAEKNSNIVASGGLGGEVFIWDLDAALAPVAKSADAKEDEVPNGNSGP
ALTTLCNVNSSSNIASSNGQSHGYSPIAAKGHKDSVYALAMNDTGTLLVSGGTEKVVRVW
DPRTGSKKMKLRGHTDNIRTLLLDSTGRYCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSV
WALASTPSFGHVYSGGRDQSVYLTDLSTRESVLLCTNEYPILQLSLQDDTIWVATTDSSV
YGWPAEGHTPQKVFEKGGSFLAGNLSFSRARASLEGSAPVPVYKEPSLVIPGVPAIIQHE
IMNNRRHVLTKDTAGSVKLWEITRGAVIEDFGKVSFEDKKKELFEMVSIPAWFTMDARLG
CLSVHLDTPQCFSAEIYAVDLNVSGAQEDLKINLAQETLRGLLVHWSKRKQKSGSHSLSN
GDSSSGKDLPSKDSPRSRSEVDDGTENHATHVLPSFEFSTVSPPSIITEGSSGGPWRKRI
TDLDGTEGDLPWWCVDCVTHNRYPKENTKCGFYLHPAEGSPAPNITQGKLSAPRILRIHK
VANYVVEKLVLEKPLDGGSDSTFAMGLSSGQSQLSALDSSSRIGLKAWQKLKPCVEILCN
NQVLSPEMSLATVRTYIWKKPEDLILHYRVVQSR
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgcatcgtgttgggagtgctggtaacacggccggctcgactcgaccgagaaaggagaag
cgcttcacgtatgtgctaaatgatgctgatgctaaaaagcattgtgcagggattaactgc
ttggcttatctaaatggttctgcaaatagtacaagtgattatctttttagtgggagtcga
gatggtaccttgaaacgatgggaattaaataatggggatgcaagtttctcagcaactttt
gagtcacatgtcgattgggttaatgatgctatcatagttggtgagaagcttgtttcctgt
tcctcagacaccaccctgaaggtgtggaattgcttctctgatggtgcctgtaccaggact
ctccgccagcattctgattatgtgatttgtcttgctgctgctgagaagaatagtaacatt
gttgcctctggtggtcttggtggtgaggtcttcatttgggaccttgatgctgctcttgct
cctgtagccaaatctgcggatgcaaaagaggatgaagttcctaatggaaactccggacct
gctttgacaactctgtgcaatgtaaattctagtagtaacattgcttcctctaatggacaa
tcacatgggtacagtccaattgccgccaaaggtcacaaagattcagtttatgcactggct
atgaatgatacaggaacccttcttgtctctggtggcactgaaaaggttgttcgagtgtgg
gatcccaggacaggttcaaaaaagatgaaattgagggggcacacagacaatatcaggacc
ttgcttcttgattctacaggaaggtattgtctatcaggatcatctgattcgatgataaga
ctatgggatctaggacagcagcgttgtgtccattcttatgctgtgcatactgattcagtt
tgggcacttgcaagcactccttcatttggtcatgtctacagtggtggaagagaccaatct
gtatacctgacagatttgtcaacaagagagagtgtcttactctgcacaaatgaataccct
attctacagctgtctctgcaagatgacacgatatgggttgcaacaaccgattcttctgtt
tatggatggccagctgaaggacacacaccccaaaaggtcttcgaaaagggtggctcattc
ttagctgggaatttgtcattctcaagggcaagagcttctttagagggatcagcacctgtg
cctgtatacaaagaaccatctttggttatcccaggagttccagcaataattcagcatgag
ataatgaataataggaggcatgtactgacaaaggatactgctggttctgtcaagctgtgg
gagattacccggggagctgttattgaagactttggcaaggtttcttttgaagataagaaa
aaagagttgtttgagatggtaagcatacctgcctggttcaccatggatgctcgattggga
tgcttgtctgtacacctggatactccacaatgcttttctgcagaaatatatgcggttgac
ctaaatgtttctggagcgcaagaagaccttaagattaatttggctcaggagacccttcgt
ggtttgctagttcattggagtaaaagaaaacagaagtctggttcacatagcttgtcgaat
ggtgatagttcatcagggaaggatcttccttcaaaagactcaccgcggtcaagatccgag
gtggatgatgggaccgaaaaccatgcaactcatgtgcttccgtcatttgagttttccacg
gtttcgcctccgtcaattatcacggaaggttctagtggagggccctggagaaagagaatt
actgatttggatggaactgagggtgatctcccatggtggtgtgttgactgtgtcacgcac
aatcgttatccaaaggagaatacaaaatgcggcttttatttgcatcctgctgagggatca
ccagcaccgaacataactcaaggcaagctgagtgctccacggatattgcggattcacaaa
gtagctaattatgtggtcgagaaactcgttcttgaaaaaccattggacggaggctctgac
agcacatttgctatgggattgagttctggtcaatcgcagctctcagcgctagatagttct
tcgcggattggactaaaggcatggcaaaaactaaagccatgtgtagagatattgtgcaat
aaccaggttctatcgccagagatgagtttggctacagtgagaacatatatttggaagaag
ccggaagacttaattcttcattatagagtggtgcagtcgagatga

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