Setaria viridis (green foxtail): 117863971
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Entry
117863971 CDS
T07951
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117863971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117863971
03036 Chromosome and associated proteins [BR:
svs03036
]
117863971
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
117863971
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
117863971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
eIF2A
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_1st
Beta-prop_VPS8
RMC1_N
Beta-prop_SPT8
WDR54
CFAP43_N
YajC
Motif
Other DBs
NCBI-GeneID:
117863971
NCBI-ProteinID:
XP_034603811
LinkDB
All DBs
Position
7:28159812..28162670
Genome browser
AA seq
475 aa
AA seq
DB search
MDAGSNSISSQKCGSRRAAPPRPALQEAGSRPYMPPLSTGPRNPSAKCYGDRFIPERSAM
DMDFAHYLLTEPRKGKENPAAAVSPAKEAYRKLLAEKLLNNRTRILAFRNKPPEPQNVLT
DLRSDVVQAKPAKQRRHIPQSSERTLDAPELADDYYLNLLDWGSSNVLSIALGSTVYLWD
ASSGSTSELVTIDEDFGPVTSVSWAPDGRHIAVGLNSSDVQLFDTTSNRLLRTLRGVHEL
RVGSLAWNDSILTTGGMDGKIVNNDVRIRNSVVQTYHGHEQEVCGLKWSGSGQQLASGGN
DNLLHIWDVSMSSSVQSAGRTQWLHRLQDHLAAVKALAWCPFQSNLLASGGGGGDRCIKF
WNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTS
RVLFMAQSPDGCTVASAAADETLRFWNVFGTPEAAPKAAAKASHTGIFNSFNHIR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggatccaactccatctcgtcgcagaagtgcggcagccgacgcgcggcgccg
ccgcggccggcgctccaggaggcagggtccaggccgtacatgccgccgctcagcacgggg
ccccgcaacccgtcggccaagtgctacggcgacaggttcatcccggagcggtcggcgatg
gacatggactttgcgcattacctgctgacggagccgaggaagggcaaggagaacccggca
gcggcggtgtccccggccaaggaggcgtaccgcaagctgctggccgagaagctgctcaac
aaccgcaccaggatactcgccttccggaacaagccgccagagcctcagaacgtgctcacg
gatctccgttctgatgtggtccaagccaagccggcgaagcagcgccgacacattccccag
tcttcagagaggactctggatgcgccagagctcgctgacgattactacctcaacctgcta
gattggggaagcagcaatgtgctgtccattgcgctaggcagcacggtgtacctctgggat
gcctccagtgggtctacttctgagcttgttaccattgatgaggactttggtcctgtcaca
agcgttagctgggctcctgatggccggcacattgctgtaggactgaactcctctgatgtc
cagctttttgacactacctcgaaccgactgctgaggacactgcgaggtgtgcatgagttg
agggtcggttctctggcatggaacgacagcatcttgacaactggtggcatggatggcaag
atcgtgaacaatgatgtgaggatcaggaacagtgttgtgcagacataccatggacatgag
caggaggtgtgtgggctcaaatggtcaggatcagggcagcaactggccagtggtggaaat
gacaacctcctacacatctgggatgtgtccatgtcatcctctgtgcagtctgcagggcgt
acgcaatggttgcacaggcttcaggatcacttggctgccgtgaaggcactggcatggtgc
ccattccaaagcaacctgctggcttctggcggtggtgggggtgatcgctgcatcaagttc
tggaacacccacactggtgcatgcctcaactcagttgacactggatcgcaagtgtgcgca
ctgctctggaacaagaatgagagggagctgctaagctcacacgggttcactcagaatcag
ctcaccctgtggaagtacccatcgatggttaagatggccgaactcaatggccatacctcc
cgcgtcctgttcatggctcagagccctgatggatgcaccgtggcatctgctgcagcagat
gagacattaaggttctggaatgtgtttggaactcctgaagcggcgcctaaggctgcagcc
aaggcttcccacactgggatcttcaatagcttcaaccatatccgatga
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