Setaria viridis (green foxtail): 117864044
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Entry
117864044 CDS
T07951
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00061
Fatty acid biosynthesis
svs00071
Fatty acid degradation
svs01100
Metabolic pathways
svs01212
Fatty acid metabolism
svs04146
Peroxisome
Module
svs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117864044
00071 Fatty acid degradation
117864044
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117864044
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
svs01004
]
117864044
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117864044
Enzymes [BR:
svs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117864044
Lipid biosynthesis proteins [BR:
svs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117864044
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of breast milk
117864044
Exosomal proteins of breast cancer cells
117864044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
117864044
NCBI-ProteinID:
XP_034603905
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Position
7:34735039..34745926
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AA seq
693 aa
AA seq
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MEDAQRRLRAVAAHLQPPATAAGCGLAANPTAGEYVHAQGYSVVLPEKLQTGKWNVYRSA
RSPLRLISRYPDNPDIGTLHDNFEYAVDTFRDCRYLGTRIRADGTIGDYKWMTYGEASTS
RTAVGSGLIYHGVLEGARIGLYFINRPEWIIVDHACASYSYVSVPLYDTLGPDAVQFIVN
HAAVEVIFCVPQTLSILLSFVAQMPCVRLIVVVGGNDANMPSTPGTTGVQIITFSRLLIQ
GKASPQPFRPPKPEDVATICYTSGTTGTPKGAVISHENLIANVAGSSLNIKFYPSDVYIS
YLPLAHIYERVNQVALLHCGVAVGFYQGDNLKLMDDLAVLRPTVFASVPRLYNRIYAAIT
NAVKESGGLKEKLFHSAYNAKRQAIIKGRNPSPMWDKLVFNKIKARLGGRVRLMSSGASP
LSADVMEFLRICFGGEVIEGYGMTETSCIVTAMDIGDKSIGHVGSPISSCEVKLVDVPEM
NYSSDDQPYPRGEICVRGPTIFRGYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGRLRIID
RKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSFNSSLVAIVAVEPEVLKAWAGS
EGIQYEDLRQLCADPRARAAVLADMDSIGKEAQLRGFEFAKAVTLVAEPFTLENGLLTPT
FKVKRPQAKAYFAKEISDMYAELQETETARAKL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcccagcgccggctccgtgcggtcgccgcccacctccagccgccggccacc
gccgcgggctgcggcctcgccgccaaccccaccgccggcgagtacgtccacgcgcagggc
tacagtgtcgttctccctgagaagttgcaaactggaaagtggaacgtgtaccggtctgca
cgttcacctctaaggttgataagtagatatcctgacaatccagacattggaacactgcat
gataattttgagtatgcagttgatacttttagagattgtagatacctgggaacaaggatc
agagctgatgggacaattggagactacaaatggatgacgtatggagaagctagcacgagc
aggactgcagtaggttctggccttatttatcatggagtacttgaaggtgcacgcattggt
ctgtattttataaacagacctgagtggattatagttgaccatgcttgtgcttcatattca
tacgtatctgtgccactttatgacactcttggtcccgatgctgtccaattcatcgtgaac
catgcagctgtggaagttatattctgtgtgcctcaaactctaagcattctgttaagtttt
gtagctcaaatgccatgtgttcggcttatagtggtagttggtggaaacgatgcaaatatg
ccttcaactccgggaaccactggagtgcaaatcataactttctccaggctactcatccag
ggaaaggctagtcctcaaccttttcgtcctccaaaacctgaagatgttgccactatctgt
tacactagtggcactactggcacgccaaagggagctgttatttctcatgagaacttaatt
gcaaatgtagcagggtcaagcctgaacattaagttttacccctccgatgtgtatatctca
tatctacctttggctcacatctacgagagggttaaccaggttgcattgctgcactgtggt
gttgcggttggattctaccaaggggataatttgaagctaatggacgatttggctgttttg
agaccgacagtattcgcaagtgttccccggttgtataacagaatttatgccgcaattact
aatgctgtgaaggagtctggtgggctgaaagaaaagctgtttcattctgcatacaatgcc
aagagacaagcaatcattaaagggcgaaatccatccccaatgtgggataagttggtattt
aacaaaataaaagctaggcttggtgggcgtgtgagactcatgagttcaggtgcttctcca
ctgtcagcagatgtcatggaattcctaagaatatgctttggtggtgaagttattgaaggc
tatggaatgacagaaacatcttgtatcgtaactgcgatggatattggtgataaatcaatt
ggtcatgttggatccccaatttcatcttgtgaggtgaaacttgtggatgtcccagaaatg
aattatagttctgatgatcaaccatatcctcgtggagaaatttgtgttagaggacctaca
atatttcggggttactacaaagatgaagtccaaacaaaagaagtcattgatgaagatggt
tggttgcacactggagacataggtctgtggctgcctggagggcgtttaaggattattgat
aggaaaaagaacattttcaagttagctcaaggagaatacatagctccagagaagatcgaa
aatgtatatgccaaatgcaaattcattgcccaatgctttatatatggtgatagtttcaac
tcttccctagttgccattgttgcagttgaaccagaggttttgaaggcttgggctgggtct
gaaggaatccagtacgaagacttaaggcagctttgtgctgatcctagagcaagagctgct
gtcctagctgatatggattctattggaaaggaagcacagctaagaggttttgaatttgct
aaagctgttacgcttgttgctgaaccatttacattggagaatggtctcctcaccccaaca
ttcaaggtcaaaagaccgcaagctaaagcatactttgcaaaagaaatctcagatatgtat
gcagagttgcaagaaacggagacagccagggcgaagttgtaa
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