Setaria viridis (green foxtail): 117864190
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Entry
117864190 CDS
T07951
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117864190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117864190
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
RNases
117864190
SSDB
Ortholog
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GFIT
Other DBs
NCBI-GeneID:
117864190
NCBI-ProteinID:
XP_034604104
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All DBs
Position
7:complement(32721794..32725444)
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AA seq
456 aa
AA seq
DB search
MAKRLAAAEKEVLVEVVRFTQKNGLKGSDGAWKDFLARNDRKFGASVSDPRKRSRDVLLA
FLQTFSKDFQKYFGKLVKRQKERSDVQQHMNDFPDQVSPEQKLVQLTAEHPEYRKNYCFP
SYQEGWKVLRIGDVSSLVSSSAMLAIDCEMVLCHDGTEAVVRVCVVDNNLEVKLDTLVNP
SKAITDYRTHITGVSKKDLEGVTSSLVDVQKSLKRILSKGKILIGHSLYRDLCALKIDCS
QVIDTAYIFKYANLPTTASASLNSLCKSVLGYSVREEGEPHNCLKDAEAAMNLVLAKLKH
GFNDPIEVAVSGVITESDSLKLLAHRIPVHLPCQELCKVFSGNPSIDDKIDSRIRGEFYS
TCILFNEIDEVEKAFEALDGQMTKDSGGRLQKHVLMKRDNGDVVNFYVRKMVYSSQPNQF
EVPKKRPQPTEDAEPKKEHADGDQQKKKRKSKKHVN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcggctcgccgccgccgagaaagaggtgctcgttgaggtcgtgaggttcact
cagaagaacgggttgaaaggctccgatggggcgtggaaggatttcttggctcggaacgac
aggaagtttggcgcttcagtaagcgaccccaggaagcgctcgagggatgtgctgctcgcc
ttcctgcaaaccttctccaaggatttccaaaagtacttcggcaaattggttaagcgtcaa
aaggaaagaagtgatgtgcagcagcatatgaacgattttcctgaccaggtttctcccgag
cagaaacttgttcaactgacggcagagcacccagagtacaggaaaaattattgcttccca
tcataccaagagggatggaaagtgttgcggataggagatgtctcaagtttggtgagctca
agtgctatgttggcaattgactgtgagatggtcctttgccatgatggcactgaggctgtg
gtccgagtatgtgttgtagacaacaatctggaggtgaagctggacacacttgtaaatcct
tctaaagctattactgactatagaacacacatcaccggtgtatctaagaaggatctagaa
ggagtcacatcatcattagttgatgttcagaaatcgctgaagaggatcttgtccaaagga
aagattttgattggccacagcttatatagagatttatgtgccttaaagattgattgctct
caagttattgatacagcctacatctttaagtatgccaatttacctactactgcatcagct
tccttaaacagtttgtgcaagtctgttttggggtattctgttcgagaagaaggcgaacca
cataattgcttaaaggacgcagaagctgcaatgaatctagttctcgcaaagcttaagcat
ggatttaatgatcccattgaagtggccgtaagcggtgtaataactgagtctgattcgttg
aagttgcttgctcatagaataccggtgcacctgccttgtcaagaactgtgcaaagttttc
tctgggaaccccagtattgatgacaagattgattcaaggattcgaggtgaattttattct
acatgtattttgttcaatgagatagatgaggtagagaaagcttttgaagcactggatggc
caaatgactaaggactctggtgggcgacttcaaaagcatgtgctgatgaagcgtgacaat
ggagatgtggtgaacttctacgtccggaagatggtatacagttcccagcccaaccagttc
gaagttccaaagaagagaccacagcctactgaggatgcggaaccaaagaaagaacatgcc
gatggggatcagcaaaagaagaaaagaaagagtaagaagcatgtgaactag
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